<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22667

Description Uncharacterized protein
SequenceMQLLQHPARPAIADLFTLYLGVNSKQRAEDPTRETSNKLQKRVSAHNRDLPPRDEQFISDFEQLCMPFPEQLQAVTESVLISFVLQCSSHAPQSQFLLFATRCLCARGHLRWDSLIPSLLTVVSSAEAPMGQGGSVTVGGPVSSSSAIAVPNAPSFHASNPTSPLSAMNTIGSPTQSGIDQPVGANVSPMKAAEFSTLGQPGTTSRGDQSRGGAQVSYLHHLSCRIILAGLESNLKPATHAVIFHHMVNWLVNWDQRPHGVDEADTVQTSRIGRPVHEWMHLCLDVIWILVDEEKCRIPFYELVRSNLQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGFDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNGDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNERVTMMHETYPLSMALLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMVYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLTVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRRYLCAGAWMLMNGHPEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHLVQDLLSKAITNLAFFVWTHELVPLDIVLLALIDRDDDPYALRLVISLLERSELQHRIKAFCSSRSPEHWLKNQPPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLGSSNSSICPPPEYFANLLLGLVNNVIPPLSSKSKSNPADASGGRTNFSKPHASTQAGGNSNADAQRAFYQNQDPGSYTQLVLETAAIEILSLPVPASQIVSSLVQLIAHVQAMLIQSNTGQGMSGGLGQNSGLPTSPSGAGAESAGASRGNTSASGISANFVSRSGYSCQQLSVLMIQACGFLLAQLPPEFHMQLYSEAARIIKDCRWLSDSSRPVKELNSAVGYALLDPTWASQDSTSTAIGNIVALLHSFFSNLPQEWLESSHTVIKHLRPVTSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPHVPASEIGDIIDFVHHAVMYEGQGGPVQSTSKPKVEILTLCGKVVDMLRPDVQHLLSHLKTDPTSSIYAATHPKLAQQHPS
Length1585
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy-0.062
Instability index45.77
Isoelectric point7.12
Molecular weight177065.70
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22667
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.93|      16|      23|     396|     417|       1
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  402-  417 (32.24/34.40)	WERAL...RCLR.HALRTTP
  422-  441 (24.69/ 8.47)	WRRVLlvaPCYRsHSQTSTP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.56|      20|      23|    1460|    1479|       2
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 1460- 1479 (34.78/22.36)	LRIAFRILGPLLPRLAFARP
 1485- 1504 (33.78/21.48)	LALLFNVLGDVFGKNSQASP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.70|      15|      16|    1164|    1178|       3
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 1164- 1178 (27.11/15.00)	LGVSTKT..PFSESFAQ
 1180- 1196 (24.58/12.87)	LGSSNSSicPPPEYFAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.46|      13|      23|     317|     329|       4
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  317-  329 (23.57/11.32)	DDAVICIIMEIHR
  342-  354 (26.90/13.80)	DQHLHCPTFGTHR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     129.72|      41|     348|     355|     399|       5
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  355-  399 (63.29/54.39)	FLSQSYPSIAG.ESvaNLRYSPITyPSVLGEPlHGEDLANSIP....KGG
  704-  749 (66.44/41.35)	FLGQAVPSIAMvET..YVRLLLIT.PHSLFRP.HFTTLTQRSPsilsKSG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.89|      20|      22|     135|     154|       6
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  122-  141 (31.35/16.90)	VVSSAEAPMGQGGSVTVGGP
  142-  161 (33.55/18.63)	VSSSSAIAVPNAPSFHASNP
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      87.47|      21|      22|    1388|    1408|       7
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 1388- 1408 (36.53/23.66)	WLSDSSRPVKELNSAVG..YALL
 1412- 1429 (21.93/11.01)	WASQDS.....TSTAIGniVALL
 1440- 1459 (29.00/17.14)	WLESSHTVIKHLRPVTS..VAM.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.40|      36|     348|     250|     290|      10
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  250-  290 (63.14/47.88)	WLVNWDQRPHgvDEADTVQTsriGRPVHEW...............MHL...CLDVIWIL
  581-  634 (54.25/29.39)	WSFNTSIREH..LNSDQLQK...GKQIDEWwkqmtkasgermidfMNLderAMGMFWVL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     128.69|      42|     348|     482|     525|      11
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  483-  524 (73.99/48.51)	FFLMK...SGCIDFLDFVDK...LASRVTNGDQQILRSNHVTW...LLAQI
  813-  863 (54.70/28.45)	FFLVKkelKGPTEFTETLNRitiISLAITIKTRGIAEVEHMVYlqpLLEQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     252.25|      69|     630|     883|     952|      13
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  883-  952 (121.88/73.31)	IRDFL..TVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSH..SFPQHRRYlCAGAWMLMNGHP
 1350- 1377 (24.56/ 8.00)	.....................QQLSVLMIQACGFLLA.QLPPEFHMQLYS........................
 1514- 1584 (105.81/59.45)	IIDFVhhAVMYEGQGGPVQSTSKPKVEILTLCGKVVDM.LRPD.VQHLLSHlkTDPTSSIY.AATHPKLAQQHP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      32.87|      12|      15|    1019|    1031|      14
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 1019- 1031 (14.68/14.97)	LDIVlLALIDRDD
 1036- 1047 (18.20/12.20)	LRLV.ISLLERSE
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.92|      14|      19|    1117|    1135|      15
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 1117- 1131 (18.52/ 9.26)	TDIADrVLAFYSTFL
 1139- 1152 (25.40/17.88)	TFVRD.ILAYFYGHL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     112.17|      30|     768|     219|     248|      16
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  219-  248 (51.70/37.27)	LHHLSCRIILAGLESNL..KPATHAVIF...HHMV
  959-  979 (22.80/11.72)	.........LARVLREF..SPEEVTANI...YTMV
  983- 1017 (37.67/24.87)	LHHIQLELQRGHLVQDLlsKAITNLAFFvwtHELV
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22667 with Med23 domain of Kingdom Viridiplantae
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