<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22664

Description Uncharacterized protein
SequenceMDGGHGQRQPLSPAISASAVLPHQRQMQLLQHPARPAIADLFTLYLGVNSKQRAEDPTRETSNKLQKRVSAHNRDLPPRDEQFISDFEQLCMPFPEQEQLQAVTESVLISFVLQCSSHAPQSQFLLFATRCLCARGHLRWDSLIPSLLTVVSSAEAPMGQGGSVTVGGPVSSSSAIAVPNAPSFHASNPTSPLSAMNTIGSPTQSGIDQPVGANVSPMKAAEFSTLGQPGTTSRGDQSRGGAQVSYLHHLSCRIILAGLESNLKPATHAVIFHHMVNWLVNWDQRPHGVDEADTVQTSRIGRPVHEWMHLCLDVIWILVDEEKCRIPFYELVRSNLQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGFDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNGDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNERVTMMHETYPLSMALLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMVYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLTVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRRYLCAGAWMLMNGHPEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHLVQDLLSKAITNLAFFVWTHELVPLDIVLLALIDRDDDPYALRLVLGLALMINLTLQISLLERSELQHRIKAFCSSRSPEHWLKNQPPKRAELQKALGNHLSWKDRYPPFFDDIAARLLPVIPLIIYRLIENDATDIADRVLAFYSTFLAFHPLRFTFVRDILAYFYGHLPSKLIVRILNVLGVSTKTPFSESFAQYLGSSNSSICPPPEYFANLLLGLVNNVIPPLSSKSKSNPADASGGRTNFSKPHASTQAGGNSNADAQRAFYQNQDPGSYTQLVLETAAIEILSLPVPASQIVSSLVQLIAHVQAMLIQSNTGQGMSGGLGQNSGLPTSPSGAGAESAGASRGNTSASGISANFVSRSGYSCQQLSVLMIQACGFLLAQLPPEFHMQLYSEAARIIKDCRWLSDSSRPVKELNSAVGYALLDPTWASQDSTSTAIGNIVALLHSFFSNLPQEWLESSHTVIKHLRPVTSVAMLRIAFRILGPLLPRLAFARPLFMKTLALLFNVLGDVFGKNSQASPHVPASEIGDIIDFVHHAVMYEGQGGPVQSTSKPKVEILTLCGKVVDMLRPDVQHLLSHLKTDPTSSIYAATHPKLAQQHPS
Length1625
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy-0.064
Instability index46.20
Isoelectric point7.13
Molecular weight181325.57
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IBA:GO_Central
transcription regulator complex	GO:0005667	IBA:GO_Central

GO - Biological Function
GO - Biological Process
positive regulation of gene expression	GO:0010628	IBA:GO_Central
regulation of transcription by RNA polymerase II	GO:0006357	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22664
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     483.17|     222|     347|     278|     553|       1
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  278-  424 (129.17/164.73)	...................................................................................................................................................................................................WLVNWDQRPHgvDEADTVQTsriGRPVHEW...............MHL...CLDVIWILvdeekcripfyelvrsnlQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQhlhcpTFGTHR............................FLSQSYPSIAG.ESvaNLRYSPITyPSVLGEPlHGEDLANSIP
  425-  553 (114.00/125.53)	KGGFDWeRALRCLRHALRttpspdwwrrvllvaPCYRSHSQtsTPGAVFSPDMIGEAVADRTIE..LLKLtnSETQCWQDWLLFADifFFLMKS...GCIDFLDFVDKL...ASRVTNGDQQILRSNHVTWL...LAQII.........................................................................................................................................................................................................................................................
  609-  770 (131.26/85.53)	............................................................................................................................................rieivmntlssdprkvettrkiisfhkedksldpnnispqsilldfisssqtlriWSFNTSIREH..LNSDQLQK...GKQIDEWwkqmtkasgermidfMNLderAMGMFWVL..................SFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNER.....VTMMHEtyplsmallsglsinlclklayqleetiFLGQAVPSIAMvET..YVRLLLIT.PHSLFRP.HFTTLTQRSP
  775-  892 (108.75/64.84)	KSGVSL.LLLEILNYRLL...............PLYRYHGK..SKALMYDVTKIISMIKGKRGEhrLFRL..AENLCMNLILSLRD..FFLVKKelkGPTEFTETLNRItiiSLAITIKTRGIAEVEHMVYLqplLEQIM.........................................................................................................................................................................................................................................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.70|      15|      16|    1204|    1218|       2
---------------------------------------------------------------------------
 1204- 1218 (27.11/17.66)	LGVSTKT..PFSESFAQ
 1220- 1236 (24.58/15.16)	LGSSNSSicPPPEYFAN
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.97|      13|      16|    1043|    1055|       4
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 1043- 1055 (20.91/10.96)	ELVPLDIVL.LALI
 1060- 1073 (18.06/ 8.51)	DPYALRLVLgLALM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.28|      14|      18|     169|     182|       5
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  169-  182 (24.27/12.95)	PVSSSSAIAVPNAP
  189-  202 (26.00/14.43)	PTSPLSAMNTIGSP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.56|      20|      23|    1500|    1519|       6
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 1500- 1519 (34.78/22.32)	LRIAFRILGPLLPRLAFARP
 1525- 1544 (33.78/21.44)	LALLFNVLGDVFGKNSQASP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.57|      16|      16|     972|     987|       8
---------------------------------------------------------------------------
  972-  987 (30.81/19.30)	AWMLMNGHPEINSANL
  988- 1003 (26.77/15.77)	ARVLREFSPEEVTANI
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     153.63|      50|    1232|     207|     267|      10
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  207-  267 (75.65/81.22)	IDQPVG.ANVSPMKAAEFSTlgqpgTTSRGDqsrggaQVSYLHHLSCRIILAGLES......NLKPAT
 1439- 1495 (77.97/55.01)	LNSAVGyALLDPTWASQDST.....STAIGN......IVALLHSFFSNLPQEWLESshtvikHLRPVT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.92|      14|      19|    1157|    1175|      14
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 1157- 1171 (18.52/ 9.03)	TDIADrVLAFYSTFL
 1179- 1192 (25.40/17.42)	TFVRD.ILAYFYGHL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22664 with Med23 domain of Kingdom Viridiplantae
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