<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22662

Description Uncharacterized protein
SequenceMPFPEQEQLQAVTESVLISFVLQCSSHAPQSQFLLFATRCLCARGHLRWDSLIPSLLTVVSSAEAPMGQGGSVTVGGPVSSSSAIAVPNAPSFHASNPTSPLSAMNTIGSPTQSGIDQPVGANVSPMKAAEFSTLGQPGTTSRGDQSRGGAQVSYLHHLSCRIILAGLESNLKPATHAVIFHHMVNWLVNWDQRPHGVDEADTVQTSRIGRPVHEWMHLCLDVIWILVDEEKCRIPFYELVRSNLQFLENIPDDDAVICIIMEIHRRRDMVCMHMQMLDQHLHCPTFGTHRFLSQSYPSIAGESVANLRYSPITYPSVLGEPLHGEDLANSIPKGGFDWERALRCLRHALRTTPSPDWWRRVLLVAPCYRSHSQTSTPGAVFSPDMIGEAVADRTIELLKLTNSETQCWQDWLLFADIFFFLMKSGCIDFLDFVDKLASRVTNGDQQILRSNHVTWLLAQIIRIEIVMNTLSSDPRKVETTRKIISFHKEDKSLDPNNISPQSILLDFISSSQTLRIWSFNTSIREHLNSDQLQKGKQIDEWWKQMTKASGERMIDFMNLDERAMGMFWVLSFTMAQPACDAVMTWFTSAGGAEFMQGPNMQPNERVTMMHETYPLSMALLSGLSINLCLKLAYQLEETIFLGQAVPSIAMVETYVRLLLITPHSLFRPHFTTLTQRSPSILSKSGVSLLLLEILNYRLLPLYRYHGKSKALMYDVTKIISMIKGKRGEHRLFRLAENLCMNLILSLRDFFLVKKELKGPTEFTETLNRITIISLAITIKTRGIAEVEHMVYLQPLLEQIMATSQHTWSEKTLRYFPPLIRDFLTVRADKRGQAIQAWQQAETTVINQCNQLLSPSAEPNYVMTYLSHSFPQHRRYLCAGAWMLMNGHPEINSANLARVLREFSPEEVTANIYTMVDVLLHHIQLELQRGHLVQDLLSKAITNLAFFVWTHELVPLDIVLLALIDRDDDPYALRLVISLLERSELQHRIKAFCSSRSPEHWLKNQPPKRAELQKALGNHLSWKDRYRRQGSRILFYLSRFPPTEIYICAGYSCILLWSSSKQVNCPDPQRAGC
Length1073
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.08
Grand average of hydropathy-0.104
Instability index48.13
Isoelectric point7.24
Molecular weight121783.23
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22662
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.93|      16|      22|     333|     354|       1
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  339-  354 (32.24/26.23)	WERAL...RCLR.HALRTTP
  359-  378 (24.69/ 6.46)	WRRVLlvaPCYRsHSQTSTP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.89|      20|      22|      72|      91|       2
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   59-   78 (31.35/16.03)	VVSSAEAPMGQGGSVTVGGP
   79-   98 (33.55/17.62)	VSSSSAIAVPNAPSFHASNP
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.39|      10|      22|     792|     801|       3
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  792-  801 (18.02/11.19)	YLQPLLEQIM
  815-  824 (19.37/12.67)	YFPPLIRDFL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.46|      13|      23|     254|     266|       5
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  254-  266 (23.57/14.03)	DDAVICIIMEIHR
  279-  291 (26.90/17.03)	DQHLHCPTFGTHR
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      46.53|      13|      23|     610|     622|       6
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  610-  622 (24.74/13.75)	MHETYPLSMALLS
  636-  648 (21.79/11.35)	LEETIFLGQAVPS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     131.25|      36|     168|     862|     898|       7
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  862-  898 (65.68/45.82)	VMTYLSHsFPQHRRYLCAG..AWMLMNGHPEINSANLAR
 1033- 1070 (65.57/41.23)	ILFYLSR.FPPTEIYICAGysCILLWSSSKQVNCPDPQR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     205.10|      71|     254|     650|     732|      13
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  650-  732 (98.41/101.63)	AMVETYVRLLLitpHslfrpHFTTLTQRS...PSILSKSgVSLLLLEILNYRLLPLyryHGKSKALM......YDVTKIISMIKGKRGEHRL
  910-  989 (106.69/72.90)	ANIYTMVDVLL...H.....HIQLELQRGhlvQDLLSKA.ITNLAFFVWTHELVPL...DIVLLALIdrdddpYALRLVISLLERSELQHRI
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     117.40|      36|     328|     187|     227|      16
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  187-  227 (63.14/59.23)	WLVNWDQRPHgvDEADTVQTsriGRPVHEW...............MHL...CLDVIWIL
  518-  571 (54.25/36.42)	WSFNTSIREH..LNSDQLQK...GKQIDEWwkqmtkasgermidfMNLderAMGMFWVL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22662 with Med23 domain of Kingdom Viridiplantae
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