<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22647

Description Uncharacterized protein
SequenceMEAHRRWDTSGSGSRYSFRTSVSSLADLGGEIVEAEAEAGRAAADRVFVAVPGEVKHGKSALQWALQNLAKDGAQVVVAHVHRPAQMIPMMGAKMHYTRLDPEQVKDYRKQELEKALERLEEYVVICTILKVNCEKIIIEKDDVAKGLEELIVLHGITRLVMGAAADKHYSKKMKRPKSKTALRLMEAEASPCKIWFTCKGELICTREANTTVPMIPPSPASTVASTLSASSISSHMRSITIHHSESEAPSSNGSPQQNLNRSRTEVMRHHSRGAGGTPPQLFEPLELNANARPTRTPLSSMDSWDEFGRRSQSSWYNLSRNDDAISVSESATHHPMHESDDDRFSSPFHELENSGADAEMYSRLEEALRETQESKKEVFEESTKRRKAELDLLSALQKAKELEKLYHHELRQRKTIEETLVRQAQELEATKIQCDTIYDQLHDAEEQKAVLEQRMTEMESALRDGEEKLATSKCLLEALQADKEKLQQERDAAAEELHQKSEQRISMATEALNTEFSAVELEQATRSFDEALKIGEGGFGCVYKGSLRSTTVAIKLLHPKSLQGQSEFNQEVAVLGRVRHPNLVALIGSCREAFGLVYEYLPNGSLEDRLACAGDTPPLTWQVRTRIIYEMCSALTFLHSNKPHPVVHGDLKPANILLDANLVSKLGDFGICRLLTQSGTSTAATTLYRTTTPRGTFAYMDPEFLSSGELTPRSDVYSLGIIILQLLTGRRPQKIAEVVEDAVEKGELHTVLDTSAGAWPFVQANQLAHLGLRCAEMSRRRRPDLAREVWTVVEPLMKAASLTARRPTFAASPDEASTPSYFVCPIFQEMMSDPHIAADGFTYEAEAIRGWLDSGHDTSPMTNLKLAHRELTPNRGLRSVILEWQLQHQRYHEDWR
Length897
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.490
Instability index49.68
Isoelectric point5.97
Molecular weight100352.37
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22647
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     206.67|      55|      58|     391|     448|       1
---------------------------------------------------------------------------
  330-  371 (57.87/32.88)	.............ESATHHPMHESD..DDRFSSPFHELENSGADAE.MYSRLEEALRE
  391-  448 (79.50/58.94)	LDllSALQKAKElEKLYHHELRQRKTIEETLVRQAQELEATKIQCDTIYDQLHDAEEQ
  459-  504 (69.30/41.87)	ME..SALRDGEE.......KLATSKCLLEAL..QADK.EKLQQERDAAAEELHQKSEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     196.71|      50|      50|     696|     745|       3
---------------------------------------------------------------------------
  637-  694 (51.69/32.05)	.TF.LHSNkPHPVVHG..DLKPANillDanlVSKLGdFGICRLLTQSGTSTAATTLyRTTTP
  696-  745 (81.54/55.09)	GTF.AYMD.PEFLSSG..ELTPRS...D...VYSLG.IIILQLLTGRRPQKIAEVV.EDAVE
  747-  795 (63.49/41.16)	GELhTVLD....TSAGawPFVQAN...Q...LAHLG.LRCAEMSRRRRPD.LAREV.WTVVE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22647 with Med32 domain of Kingdom Viridiplantae
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