<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22642

Description Uncharacterized protein
SequenceMAAEGDEEGAAAPKMVGLALSGPKSSAYVLRWALRNFAQDDAPPAEFKLIHVLTPVLAVPTPLGHLLPIDEVSNSVAEGELEKMWIEKQEMLQRCKDTCDENKVEAQVLLVEGKDVADTISSLVSQYQIHNLVIGNPPSKSPFTRRSTASRTACKICKCLPSFCTAYVVSKDGLSSVHVPESESGSPSGSPVPKGNSGSSSTKEFTDGTSSRSDLDGSSAPGLPSFTLNDYLTGNAPVYADKERRIASRTGAESSILSQFRGSDKVPTSSLQELMLSDNKDDVSTELGKLNLEPSHNRLLATASKDADRESRLEKPLVLPSDSYSMFTWEEIDNATASFSLKIGTGSNGTVYKGHLNHLDVAIKVLHSDDKSSTRHFNQELEVLSKIRHPHLLMLLGACPDRGCLVYEYMENGSLADRLQRRKGTPPIPWFDRFRIAWEIGSALVFLHSTKPSPIIHRDLKPENVLLDRNLVSKIGDVGLSTLMPPKETLSNRTVYKKTGLAGTLFYLDPEYQRTGQVSVKSDTYALGMVILELLTARCPIGLPEVVEQAVEDGQISNVLDESAGDWPVREAHDLAQLGLNCLEMRSKDRPDLNSVVLEELGRLKRIAASVSGVALPGSPSHFKCPILKTVMYDPCIASDGYTYERSAMEMWLCDKDVSPVTKARLRDKTLLPNLSLKSAIVRWVADGGRPVKE
Length694
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.299
Instability index45.99
Isoelectric point5.85
Molecular weight75842.42
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22642
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     168.16|      52|     106|     264|     330|       1
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  213-  264 (86.86/64.59)	SDLDGSSAPGLPSFTL...NDYLTGNAPVYADKERRIASRTGAESSILSQFRGSD
  277-  331 (81.30/48.43)	SDNKDDVSTELGKLNLepsHNRLLATASKDADRESRLEKPLVLPSDSYSMFTWEE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     233.13|      76|     138|     342|     428|       2
---------------------------------------------------------------------------
  342-  428 (125.53/123.41)	KIG............TGSNGTVYK.....GHLNHLDVAI.KVLHSDDKSSTRHfnqelevLSKIrhphLLMLLGA.CP.DRGCLVYEYMENGSLADRLQRRKGTPPI
  474-  569 (107.60/80.28)	KIGdvglstlmppkeTLSNRTVYKktglaGTLFYLDPEYqRTGQVSVKSDTYA.......LGMV....ILELLTArCPiGLPEVVEQAVEDGQISNVLDESAGDWPV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.46|      16|      59|     135|     151|       3
---------------------------------------------------------------------------
  135-  151 (27.89/20.28)	GNPPSKS..PFTrRSTASR
  195-  212 (24.57/12.41)	GNSGSSStkEFT.DGTSSR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      56.32|      15|     431|     175|     193|       4
---------------------------------------------------------------------------
  175-  193 (24.82/20.78)	SSVHVPesesGSPSGSPVP
  612-  626 (31.50/16.64)	SGVALP....GSPSHFKCP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22642 with Med32 domain of Kingdom Viridiplantae
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