<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22633

Description Uncharacterized protein
SequenceMDAAAAPGAAAGGQQQQQQQPAPPRAERLNGEVQSQLNLEGMRARAVGLYKAISRILEDFDAIARVNPSGSPKWQDVLGQFSMVSMELFNIVEDIKKVNKGFVVYPRNVNAENAAILPVMLSSKLLPEMEVEETTKREQLLSGITNLPVPSQMEKLKARIDMIANACETAERVIAECRKTHGLGARQGANLGPMLDKAQAAKIQEQESLLRAAVNYGEGLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNSGAYPKNTPAFSPNNVNAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPRSGTNMMNTPSPQQHLTPQQQRQKLMQASQQQQQQLRPSAAGMLAQSSVPQLQDLQGQAQQKVAGQQQMQYSQAQALSQFQNRQMQAARMQPGMSQSQLNQGNQLRSHLGQFTGAANSAMFTAAQASSNSQMMANIPGTMQTMQSQSMMPQMQFGLTGGHPQRSHQMMTDQMYGMGGANTTSMMGMQMQQQQQQQQQQQGLYGNMQGGGQSLQQQGMVGLQNQQQNQMQGGGQSLQQQGMVGLQNQQQNQMQNQMQNQMQNQMPNPNFSQQRQQNQQ
Length590
PositionHead
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.764
Instability index58.07
Isoelectric point9.28
Molecular weight64251.50
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22633
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      87.13|      21|      21|     518|     538|       1
---------------------------------------------------------------------------
  518-  538 (43.56/11.60)	MQGGGQSLQQQGMVGLQNQQQ
  541-  561 (43.56/11.60)	MQGGGQSLQQQGMVGLQNQQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     122.66|      23|      23|     283|     305|       3
---------------------------------------------------------------------------
  256-  274 (27.34/ 9.08)	AYPKNTP...........AFSPNNVNAQGN
  283-  305 (40.14/17.05)	LLGRSAPS.....PGT..AGTPNFENVSTP
  307-  331 (31.73/11.81)	MPYANSPR.....SGTnmMNTPSPQQHLTP
  338-  363 (23.44/ 6.65)	LMQASQQQqqqlrPSA..AGM..LAQSSVP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     157.80|      26|     169|     392|     417|       4
---------------------------------------------------------------------------
  364-  389 (36.90/ 9.06)	QLQDLQGQAQQKVAGQQQ...MQYSQAQA
  392-  417 (50.01/15.51)	QFQNRQMQAARMQPGMSQ...SQLNQGNQ
  452-  474 (30.95/ 6.13)	..TMQTMQSQSMMPQM.Q...FGLTGGHP
  563-  589 (39.94/10.56)	QMQN.QMQ.NQMQNQMPNpnfSQQRQQNQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.82|      23|      26|     202|     226|       6
---------------------------------------------------------------------------
  204-  226 (38.78/34.07)	QEQESL...LRAAVNYGEGLRVSGDQ
  228-  253 (36.04/23.18)	QMHSSLpshLMEVLATGDGAHNFGDN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22633 with Med8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNSGAYPKNTPAFSPNNVNAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPRSGTNMMNTPSPQQHLTPQQQRQKLMQASQQQQQQLRPSAAGMLAQSSVPQLQDLQGQAQQKVAGQQQMQYSQAQALSQFQNRQMQAARMQPGMSQSQLNQGNQLRSHLGQFTGAANSAMFTAAQASSNSQMMANIPGTMQTMQSQSMMPQMQFGLTGGHPQRSHQMMTDQMYGMGGANTTSMMGMQMQQQQQQQQQQQGLYGNMQGGGQSLQQQGMVGLQNQQQNQMQGGGQSLQQQGMVGLQNQQQNQMQNQMQNQMQNQMPNPNFSQQRQQNQQ
2) MDAAAAPGAAAGGQQQQQQQPAPPRAERLNGEVQ
219
1
590
34










Molecular Recognition Features






MoRF SequenceStartStop




1) QQGLYG
511
516