<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22631

Description Uncharacterized protein
SequenceMAMVSRARASLPSPSSSPLPAFSPRSPQSEVVERMFTRGGSGRSSSSSASGANRSASLREIDEEAAILHDADDDDGGGKLYVAVGKDIKDSRSNLVWAARNLFAGDPKLVLLHVHQPADRIMIGLCKVPASQVEEKELKAYRKIEKEEMNTLLNQYLNFCRVSLKMQAETLVIEKNSPANGIIELIDQNRITKLVMGTSSFSVKRKVPKSKVAASVHLQAKPYCQIFYICKEALGCSREATELCAKVESPRSSFASTISDQPELTPRSLSLPPGHPGLLGATGQQPFPRRSNSVSYPLSGLIADSVENMSAARRQSIDSLLGSTDQQALPRRSNSVSYSLSGSIAGSVEIMSPARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKARESSLRKEKKEVEERLTKEKADLEKEHFHVCNELQKANEQRAELESKLLQTNALMEELQQLQVELQREKDHAVKEAEEMRQTNGNSVFGSTSAVALTEFSYTEIEEATDNFDDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQGEHQREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDNSFVCKLADFGISRPLDLTNTTVTPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPTEYTEELARLALRCCRYERKERPNLANEAWGILQAMMNCPDDKCKPPTFFICPMTQEIMRDPHIAADGFTYEGEAIKDWLQRGHKMSPMTYLSFTHHELMPNNALRFAIQEWQMQQQP
Length910
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.507
Instability index49.82
Isoelectric point6.01
Molecular weight101089.23
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22631
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     186.27|      41|      41|     278|     318|       1
---------------------------------------------------------------------------
  278-  318 (79.89/54.60)	LLGATGQQPFPRRSNSVSYPLSGLIADSVENMSAARRQSID
  320-  360 (76.26/51.74)	LLGSTDQQALPRRSNSVSYSLSGSIAGSVEIMSPARRQSID
  362-  388 (30.12/15.44)	..TPTGSSP...SSSQQSTGGSSLGLRDLDSM.........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     294.62|      92|     493|      33|     127|       2
---------------------------------------------------------------------------
   33-  127 (146.38/109.31)	ERMftRGGSGRSSSSSASG.ANRSASLREIDEEAAILHDADDDDGGGKLYVAVGKdIKDSRSNLVWAARNLFAGDPKL.....VLLHVHQPADRIMIGLCK
  528-  625 (148.24/99.59)	EEM..RQTNGNSVFGSTSAvALTEFSYTEIEEATDNFDDSKKIGSGGCGTVYKGF.LRHTTVAIKKFNREGTTGDKEFndeveTLSRMRHPNLVTLIGVCR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.24|      30|      30|     413|     442|       3
---------------------------------------------------------------------------
  400-  431 (44.03/30.83)	SEEHQHSTVEI............................heMFEQLHRVRNQLERSK....KEA
  432-  463 (35.94/23.71)	SEGRQKAERDL.........................fessmMF...KARESSLRKEK....KEV
  464-  527 (23.26/12.55)	EERLTKEKADLekehfhvcnelqkaneqraeleskllqtnaLMEELQQLQVELQREKdhavKEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.79|      19|     497|     201|     235|       6
---------------------------------------------------------------------------
  201-  219 (30.24/44.28)	FSVKRKVPKSKVAASVHLQ
  243-  261 (31.55/ 9.83)	LCAKVESPRSSFASTISDQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22631 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ASTISDQPELTPRSLSLPPGHPGLLGATGQQP
2) EIMSPARRQSIDMTPTGSSPSSSQQSTGGSSLGLRDLDSMDGSPVPASVASSEEHQHSTVEIHEMFEQLHRVRNQLERSKKEASEGRQKAERDLFESSMMFKA
3) MVSRARASLPSPSSSPLPAFSPRSPQSEVVERMFTRGGSGRSSSSSASGANRSA
255
349
3
286
451
56










Molecular Recognition Features






MoRF SequenceStartStop




1) RARAS
6
10