<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22625

Description Uncharacterized protein
SequenceMAEAGGVGRSGEGEDEDGEEERGGGAAAAEVQVYCAVGKEAGREWRANLRWVLANFPRSRHRLVLAHVHRPPHRINMMGAWVPVSQLAEHEVAAYSKLEEDRASKALDVLIDICASQRVHARKVIVSGDDAARGLVQLVDDNAIAELVMGAAADRGYTRKLRAPKSKKAVTVQRKANPSCRIWFVCKGNLICTREVSEGLSRGEPSTASTSPRSVASDYSRSKSSPPRLTLYGDGDGELLGMHHDSPDPMMAASFQRTPSRDDSDNATDHSVEDSGHEGAAEGGSSAVVQSLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDAIMEAGSLRHEAYEETRRRQKADRDLADVSMMARDAESSYHGEARRRKEMEESLARERAAVEQDRRELDAILEKIREVDNRSAELELQISDSGRVMGELDVRMSESCSVLDALRREHRGEEPAADEESMPAVDGGDQSVSFLQLGLLELEEATDRFNESTMIGGASAGSRGRVYRGSLRGMSVAVKMICPDVAVHEARFGRAVDAIARARHPNIVALVGACPEARAVVHELVPGGSLEDRLGGEAPPLPWHARCGIAYRTCSALAYLHSTATVHGDVRPTNILLEDEQCSSSKLAGLGMPGLVAPPQLPSGVALAYVEPRYLATGELTPQCDVHALGVVLLCLVTGMPAFAAKKAAQKANDGSTPWHEVVDATAGGWPMERATEVALLGLKCCDAVETGGPHRPAELLDEALSVLEAATDATPGRTWSSLSASTASDSGGAPSYFLCPILKEVMRDPQIAGDGFTYEAEAMKEWLGSGHDTSPMTNLKLPTDELMPNHALRAAIQEWRHTRPSTFQRYQ
Length842
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.432
Instability index46.23
Isoelectric point5.16
Molecular weight90843.66
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22625
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     242.64|      82|     460|       3|     102|       1
---------------------------------------------------------------------------
    9-  102 (130.35/96.57)	RSGEGEDEDGEEER.....GGGAAAAEVQVYCAVGKEA..................GREWRANLRWV.....................LANFPRSRHrlvlahvhrpPHRINMMGAwVPVSQLAEHEVAAYSKLeEDR
  438-  563 (112.29/52.89)	REHRGEEPAADEESmpavdGGDQSVSFLQLGLLELEEAtdrfnestmiggasagsrGRVYRGSLRGMsvavkmicpdvavhearfgraVDAIARARH..........PNIVALVGA.CPEARAVVHELVPGGSL.EDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.81|      15|      16|     304|     319|       2
---------------------------------------------------------------------------
  304-  318 (28.21/12.12)	HDGSEEAGDMEDALY
  322-  336 (22.60/ 8.61)	KDAIMEAGSLRHEAY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     141.31|      47|     654|     126|     179|       3
---------------------------------------------------------------------------
  126-  179 (62.67/57.80)	VSGDdaarGLVqlVDDNAIAELvMGAAADRGYTRKLRAPKS........KKAVTVQRKANPS
  782-  836 (78.64/50.03)	IAGD....GFT..YEAEAMKEW.LGSGHDTSPMTNLKLPTDelmpnhalRAAIQEWRHTRPS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22625 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAGSLRHEAYEETRRRQKADRDLADVSMMARDAESSYHGEARRRKEMEESLARERAAVEQ
2) SEGLSRGEPSTASTSPRSVASDYSRSKSSPPRLTLYGDGDGELLGMHHDSPDPMMAASFQRTPSRDDSDNATDHSVEDSGHEGAAEGGSSAVVQSLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDA
327
197
386
324










Molecular Recognition Features






MoRF SequenceStartStop




1) MEDALYEKLK
313
322