<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22624

Description Uncharacterized protein
SequenceMVEGMGSERQLVVAVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHGPYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPGSSLNHQNRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAETVAVSFAQSSVSLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTPAVISSISGTVQPIGAQQLVQNTALGSFGSNTSTVSGQGGIGTNQNMINNLGTTAISSTPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHPNGQQPSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASDTLASDWPETMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVSTQQPQMQPQQQQQQQQLQQQQHQIQQQQQQLQQLQQQQLQQHQMQMQPQGQQLQQQQQMQQMQQQQQQMQQMQHQQQQQQQQIQQQQQMQQQQQQQQQQQMQQMQQQQQQQQPQQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKITPQGPGNMSGGGYLS
Length792
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.490
Instability index51.78
Isoelectric point8.42
Molecular weight86096.46
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22624
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     194.41|      26|      26|     687|     712|       1
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  645-  670 (39.99/ 7.53)	.QQLQQQQHQIQ.QQqQQLQQLQQQQLQ
  671-  698 (50.02/11.14)	QHQMQMQPQGQQlQQqQQMQQMQQQQQQ
  699-  725 (54.06/12.60)	MQQMQHQQQQQQ.QQiQQQQQMQQQQQQ
  726-  752 (50.35/11.26)	QQQQQMQQMQQQ.QQqQQPQQLQQQPQM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     401.00|      86|      86|     312|     397|       2
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  211-  283 (82.06/39.08)	...........QASDPS.VDH..AK.NphflvlLSESFMEARTALSH.PL........................PG.....N.L.VP.NHTITKMDTAPAATVPGPPSNATP.SVNgtmMGR
  312-  397 (148.98/77.57)	SNVASQGVSAMQTSSPSIISQ..ET.N......VANEILQEHKPLVN.PI..QQQVR.................PGG..PAN.VSIL.NNLSQHRHSLTAATSMGPNMGATPIQVH...MSN
  399-  479 (81.10/38.53)	I...SSGM....TSTPAVIS......S......ISGT........VQ.PIgaQQLVQntalgsfgsntstvsgqGGI..GTN.QNMI.NNLGT......TAISSTPTMMPTPGMVQ...QTG
  481-  534 (54.02/22.95)	NALSANNSSAM...................................NmPL..AQH...................PNGqqPSKyVKIWeGTLSGQRQ........GQPVFICKLEGY...RS.
  535-  582 (34.84/11.92)	...........GTASDTLASDwpETmQ......IVRLIAQEH..MNN.....KQYV....................G..KAD.FLVF.RTLNQ..HGF........................
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22624 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMIS
2) NMINNLGTTAISSTPTMMPTPGMVQQTGVNAL
3) QQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKITPQGPGNMSGGGYLS
239
452
744
400
483
792










Molecular Recognition Features






MoRF SequenceStartStop




NANANA