<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22620

Description Uncharacterized protein
SequenceMVEGMGSERQLVVAVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHGPYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPGSSLNHQNRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAETVAVSFAQSSVSLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTPAVISSISGTVQPIGAQQLVQNTALGSFGSNTSTVSGNSNIAVSSSLANIQSNMAMGQSVPSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSTPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHPNGQQPSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASDTLASDWPETMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVSTQQPQMQPQQQQQQQQLQQQQHQIQQQQQQLQQLQQQQLQQHQMQMQPQGQQLQQQQQMQQMQQQQQQMQQMQHQQQQQQQQIQQQQQMQQQQQQQQQQQMQQMQQQQQQQQPQQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKITPQGPGNMSGGGYLS
Length812
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.483
Instability index55.14
Isoelectric point8.78
Molecular weight87911.50
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22620
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     223.51|      29|      29|     699|     727|       1
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  652-  675 (54.64/11.91)	QQPQM...QPQQ.QQQQ.QQLQ...Q..QQHQIQ
  676-  704 (49.13/10.08)	QQQ....QQLQQlQQQQLQQHQMQMQ.pQGQQLQ
  705-  734 (63.39/14.83)	QQQQM..QQMQQ.QQQQMQQMQHQQQ.qQQQQIQ
  735-  767 (56.35/12.49)	QQQQMqqQQQQQ.QQQQMQQMQQQQQqqQPQQLQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     373.28|      62|      62|     239|     300|       2
---------------------------------------------------------------------------
  192-  235 (52.06/16.53)	............PQASDPS....VDHA...................KNPHFLV...LL.SESF...M.....EARTAL......SHPLPGNLVPNHT
  239-  300 (107.85/41.63)	MDTAPAATVPGPPSNATPS....VNGTM.M...............GRQPTANV...KV.EPTTIPPM.....VSAPAF......SHMTPISNVASQG
  304-  354 (58.57/19.46)	MQTSS....PSIISQETNV....ANEIL.Q...............EHKPLVNPiqqQV.RPGG.PAN.....VS..I............LNNL.SQH
  355-  407 (64.73/22.23)	RHSLTAATSMGPNMGATP...........I.....................QV...HM.SNMISSGM.....TSTPAV.issisGTVQPIG..AQQL
  416-  481 (46.65/14.09)	FGSN.TSTVSGNSNIAVSSslanIQSNMaM...............GQ...............SVPSMaqgglMAGPQSgqggigTNQNMINNLGTTA
  482-  545 (43.44/12.65)	ISSTP.TMMPTPGMVQQTG....VNALS.AnnssamnmplaqhpnGQQPSKYV...KIwEGTLSGQR.....QGQPVF...................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.86|      15|      38|     103|     117|       4
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  103-  117 (26.63/20.64)	SSLNHQNRELQKHCL
  139-  153 (25.23/19.14)	SDHKKSNEATKESCL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22620 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNM
2) PSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSTPTMMPTPGMVQQTGVNAL
3) QQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKITPQGPGNMSGGGYLS
221
449
764
380
503
812










Molecular Recognition Features






MoRF SequenceStartStop




NANANA