<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22601

Description Uncharacterized protein
SequenceMAVVSRARASLPSPSSSPLTAFSPRSPQPEVAERMFTRGGSGRSSSSSASGANRSASLREIDEEAAILHDAYDDDGVGKLYVAVGKDVKDGRSNLVWAARNLLAGDPKLVLLHVHQPADRIMIGLCKVPASQVEEKELKAYRKIEKEEMNTLLNQYLNFCRVSLKMQAETLVIEKNSPANGIIELIDQNRITKLVMGTSSFSVKRKVPKSKVAASVHLQAKPYCQIFYICKEALGCSREATELCAKVESPRSSFASTISDQPELTPRSLSLPPGHPGLLASTGQQPLPRRSNSVSYPLSGLIADVEIMSPARRQSIDMTPTDSSPSSSQQSTGGSSLGLRDLDSMDGSPVPVSVASSEEHQHSTVSYVEIREMFEQLHRVRNQLERSKKEASEGRQKAEKNLFESSMMFKARESSLRNEKKEVEERLTREKADLEKEHIHVCNELQKANEQRAELESKLLQTNTLMEELQQLQAELQREKDHAVKEAEEMRQTNGNSVFGSTSAVALTEFSYEIEEATDNFNDSKKIGSGGCGTVYKGFLRHTTVAIKKFNREGTTGDKEFNDEVETLSRMRHPNLVTLIGVCREAKALVFEFLSNGSLEDCLQCENQREPLSWRMRIRIAADICTGLIFLHSNKPKGIAHGDLKPDNVLLDNSFVCKLADFGISRPLDLTNTTVTPYHRTNQIKGTMGYMDPGYIASGEITAQYDVYSFGVVLMRLLTGKSPLGLPNEVEAALSNDMLQDIIDTSAGEWPPEYTEELARLALRCCRYERKERPNLANEAWGILQAMMNCPDDKCKPPTFFICPMTQEIMRDPHIAADGFTYEGEAIKDWLQRGHKMSPMTYLGFTHHELIPNTALRFAIQEWQMQQQP
Length869
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.493
Instability index46.86
Isoelectric point6.01
Molecular weight96847.76
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22601
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     236.06|      93|     310|      13|     200|       1
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   13-   61 (53.64/ 7.66)	................................................................SPSSS...PLTAF....SPRSPQPEVAERMFTRGGSGRSSSSSASGAnrSASLREI
  155-  200 (54.05/126.21)	QYLNFCRVSL..KMQAETLVIEKNSPANGIIELI.DQNRIT....KLVMGTSS...................................................................
  225-  342 (128.37/44.67)	QIFYICKEALgcSREATELCAKVESPRSSFASTIsDQPELTprslSLPPGHPGllastgqqplpRRSNSvsyPLSGLiadvEIMSPARRQSIDMTPTDSSPSSSQQSTGGS..SLGLRDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     115.07|      28|      28|     373|     400|       2
---------------------------------------------------------------------------
  357-  388 (23.32/12.44)	...SEEHQHSTV......syveireMFE..Q.LHRVRNQ.LERSK
  389-  420 (28.40/16.90)	KEASEGRQKAEK............nLFEssM.MFKARESsLRNEK
  485-  525 (27.87/16.43)	KEAEEMRQTNGNsvfgstsavalteFSY..E.IEEATDN.FNDSK
  526-  551 (16.07/ 6.09)	KIGSGG................cgtVYK..GfLRHTTVA.IKKFN
  552-  572 (19.41/ 9.02)	REGTTGDKEFND.............EVE..T.LSRMR........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      55.58|      19|      29|     422|     450|       4
---------------------------------------------------------------------------
  422-  440 (31.88/35.43)	EVE..........ERLTREKADLEKEHIH
  454-  482 (23.71/ 6.18)	ELEskllqtntlmEELQQLQAELQREKDH
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22601 with Med32 domain of Kingdom Viridiplantae
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