<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22596

Description Uncharacterized protein
SequenceMAEAGGVGRSGEDDEDGEEERGGGAAAAEVQVYCAVGKEAGREWRANLRWVLANFPRSRHRLVLAHVHRPPHRINMMGAWVPVSQLAEHEVAAYSKLEEERASKALDVLIDICTSQRVHARKVIVSGDDAARGLVQLIDDHGVAELVMGAAADRGYTRKLRAPKSKKAVTVQRKANPSCRIWFVCKGNLICTREVSEELNRGEPSTASSSPRSVASDYSRSKSSPPRLTPHGDGDGELFGMHHDSPDPMVEASVRRTPSRDDSDNATDHSLEDFGHEGAAEGGLSAVVQLLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDAIMEAGSLRHEAYEEARRRQKADRDLADASMMARDAESSCHGEARRRKEMEESLARERAALEQERRELDAILVKIREVDERSAELELQITDSGRVMSELDVRMSESCSVLDALRRERRGEGPAADEESMPAVDDGDQSVSCLRLGLSELEEATDRFHESAMIGGPGAGSRGRVYKGSLRGMSVAVKVICADVAVNEARFGRAVDAIARARHPNIVALVGACPEARAVVHELVPGGSLEDRLGGEAPPLPWHARCGVAYRTCSALAYLHSTATVHGDVRPANILLEDEWCSSSKLAGLGMPGLVEPPQLPGSVALAYVEPRYLATGELTPQCDVHALGVVLLRLVTGMPAFAAKKAAQKAADGSTPWHEVVDASAGGWPMERATEVALLGLKCCDAVETGGPRRPAELLDEALSVLEAATDATPGRTWSSLSASTASDNGGAPSYFLCPILKEVMRDPQIAGDGFTYEAEAMKEWLGSGHDTSPMTNLKLPTEELMPNHALRAAIQEWRHTRPSTFHRYQW
Length842
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.439
Instability index49.46
Isoelectric point5.25
Molecular weight91140.15
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22596
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     455.66|     145|     164|     502|     658|       1
---------------------------------------------------------------------------
  502-  658 (230.49/154.66)	GM.SVAVKVICADVAVNEARFGRAVDAIARA...RHPNIVALVG.ACPEARAVVHELVPGGSLEDRLG.GEAPPlpwHARCGvayRTCSALAylHSTATVHGDVrPANIL..LEDEWCSSSKLAGLGMPGLVEPPQ..LPGSVALAYVEPRYLATGELTPQcdvHAL
  668-  822 (225.16/122.16)	GMpAFAAKKAAQKAADGSTPWHEVVDASAGGwpmERATEVALLGlKCCDAVETGGPRRPAELLDEALSvLEAAT...DATPG...RTWSSLS..ASTASDNGGA.PSYFLcpILKEVMRDPQIAGDGFTYEAEAMKewLGSGHDTSPMTNLKLPTEELMPN...HAL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.71|      26|      26|     320|     345|       2
---------------------------------------------------------------------------
  291-  313 (29.86/14.36)	......LQDVEEDPPTPSHDGSEEAGDME
  314-  342 (37.17/19.88)	DALyekLKDAIMEAGSLRHEAYEEARRRQ
  343-  370 (36.69/19.52)	KAD.rdLADASMMARDAESSCHGEARRRK
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      42.83|      13|      16|     193|     205|       3
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  193-  205 (21.87/ 9.64)	REVSEELNRGEPS
  212-  224 (20.96/ 9.00)	RSVASDYSRSKSS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     100.63|      30|      32|     225|     255|       6
---------------------------------------------------------------------------
  225-  255 (53.17/37.87)	PPRLTPHGDGDGEL..FGmHHDSPDPMVEASVR
  258-  289 (47.47/28.38)	PSRDDSDNATDHSLedFG.HEGAAEGGLSAVVQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22596 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAGSLRHEAYEEARRRQKADRDLADASMMARDAESSCHGEARRRKEMEESLARERAAL
2) VSEELNRGEPSTASSSPRSVASDYSRSKSSPPRLTPHGDGDGELFGMHHDSPDPMVEASVRRTPSRDDSDNATDHSLEDFGHEGAAEGGLSAVVQLLQDVEEDPPTPSHDGSEEAGDMEDALYEKLKDA
326
195
383
323










Molecular Recognition Features






MoRF SequenceStartStop




1) MEDALYEKLK
312
321