<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22594

Description Uncharacterized protein
SequenceMDADGRLRRALAAFGGGDVWDLVDAALAAAAPADLRARRDGIVERLYAGARCRNCDAPESPPQPPRQPAEAASPAWQEEEEEEEEVADVDGLGLEEETDEGGGLESKILAIKDFLEDPDQSEEELVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGDVRQLVKLLVRKWKEIVDGWVRLHNSGGDGGNSILTDGDSPEKTQGKSYQNARVSDFKYTPSPPQRHSGLSSERSRNNNGFESTLERHRASPAPTYHTKQNNGNNYSTTSSSAPARAMREQKDNHLDEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKNKNTFIRKPGGGGLPGRHR
Length344
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-1.017
Instability index63.48
Isoelectric point5.61
Molecular weight38113.51
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22594
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.52|      14|      18|     251|     264|       1
---------------------------------------------------------------------------
  251-  264 (27.24/13.40)	SPAPTYHTKQNNGN
  271-  284 (23.29/10.69)	SSAPARAMREQKDN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.47|      28|      44|      74|     101|       2
---------------------------------------------------------------------------
   74-  101 (48.46/27.47)	PAWQEEEEEEEE........VADVD.GLGLEEETDEG
  112-  148 (37.01/19.54)	KDFLEDPDQSEEelvsllqnLADMDiTYKALQETDIG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.31|      11|      25|     151|     161|       3
---------------------------------------------------------------------------
  151-  161 (22.42/16.61)	VNG.LRKHPS.GD
  177-  189 (12.89/ 6.22)	VDGwVRLHNSgGD
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      52.22|      14|     140|      56|      69|       4
---------------------------------------------------------------------------
   56-   69 (28.87/12.28)	DAPESPPQPPRQPA
  199-  212 (23.35/ 8.92)	DSPEKTQGKSYQNA
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22594 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CRNCDAPESPPQPPRQPAEAASPAWQEEEEEEEEVADVDGLGLEEETDE
2) GGDGGNSILTDGDSPEKTQGKSYQNARVSDFKYTPSPPQRHSGLSSERSRNNNGFESTLERHRASPAPTYHTKQNNGNNYSTTSSSAPARAMREQKDNHLDEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKNKNTFIRKPGGGGLPGRHR
52
187
100
344










Molecular Recognition Features






MoRF SequenceStartStop




1) GRLRRAL
2) KILAIKDFLE
3) LDIHDIPKPKNKNTFIRKPGGGGLPGRHR
4) RNCDAPES
5
107
316
53
11
116
344
60