<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22593

Description Uncharacterized protein
SequenceMDADGRLRRALAAFGGGDVWDLVDAALAAAAPADLRARRDGIVERLYAGARCRNCDAPESPPQPPRQPAEAASPAWQEEEEEEEEVADVDGLGLEEETDEGGGLESKILAIKDFLEDPDQSEEELVSLLQNLADMDITYKALQETDIGRHVNGLRKHPSGDVRQLVKLLVRKWKEIVDGWVRLHNSGGDGGNSILTDGDSPEKTQGKSYQNARVSDFKYTPSPPQRHSDSERSRNNNGFESTLERHRASPAPTYHTKQNNGNNYSTTSSSAPARAMREQKDNHLDEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKNKNTFIRKPGGGGLPGRHR
Length342
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-1.041
Instability index63.79
Isoelectric point5.52
Molecular weight37971.31
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22593
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     144.80|      40|      42|     219|     259|       1
---------------------------------------------------------------------------
  219-  259 (68.53/40.70)	Y...TPSPPQRHsDSERSRNNNGFESTLERHRASPAPTYHTKQN
  264-  304 (55.71/28.85)	YsttSSSAPAR...AMREQKDNHLDEKLDSARKRLQENYQEAQN
  309-  328 (20.57/ 6.77)	R...TMQVLDIH.DIPKPKNKNTF....................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     110.07|      28|      44|      74|     101|       2
---------------------------------------------------------------------------
   74-  101 (48.04/25.32)	PAWQEEEEEEEE........VADVD.G.LGLEEETDEG
  112-  148 (34.04/16.23)	KDFLEDPDQSEEelvsllqnLADMDiT.YKALQETDIG
  171-  190 (27.98/12.29)	RKWKEI.................VD.GwVRLHNSGGDG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22593 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) CRNCDAPESPPQPPRQPAEAASPAWQEEEEEEEEVADVDGLGLEEETDE
2) GGDGGNSILTDGDSPEKTQGKSYQNARVSDFKYTPSPPQRHSDSERSRNNNGFESTLERHRASPAPTYHTKQNNGNNYSTTSSSAPARAMREQKDNHLDEKLDSARKRLQENYQEAQNAKKQRTMQVLDIHDIPKPKNKNTFIRKPGGGGLPGRHR
52
187
100
342










Molecular Recognition Features






MoRF SequenceStartStop




1) GRLRRAL
2) KILAIKDFLE
3) LDIHDIPKPKNKNTFIRKPGGGGLPGRHR
4) RNCDAPES
5
107
314
53
11
116
342
60