<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22588

Description Uncharacterized protein
SequenceMQRYAGAGNSNSSGFSGGPASAGGRDSSRLDVSPYAPPNYPLNPRRQQQLAPYRLKCDREPLNNKLGPPDFYPQTPNCPEETLTKEYVQSGYKETVEGIEEAREIVLSHISYFCKPDIVGKCKEAGQVYGVPLSGSLLIKPGVYPEQRPCNEDSRRKWAEALAQPNKRLRLLSEHVPHGYRRKSLFDVLTRCNVPLLRATWFVKVTYLNQVRPTSSSISTGASDNQRSNQWTKDVVEYLQQLLDESSLKEAHPSFKEQPSAGLISGATQVKLKHEAPSAGGDTEEPLVHFKWWYMVRLVQWHLTEELLVPSVLIEWLCYQLQERDSVEALELLLPIVLGLVETITLSQTYVRMFVEILVRRLSDASAVDNPKRSSINSVIAELLRYMVLAVPDTFVSLDFFPLPSFVAPDVYGRGALLKITGGGEMSSSKRRDVYRYLSCGYAVCSIQRRASDLATLASPNVHARGAAKVVQALDKALVTGNLTMAYSSLFNDLSDALMEERWIKEVSPCLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRTSPSQNVKFTGRRDSSQIHLAVSILKSKMTEMNKLSRSKSSSRIAMNNIGKGSSLNDVSVAATKVGDSSGLRSNGKNEEEKKERKDIFESPGPLHDIIVCWLDQHEVSSAAGFKRVDVLIIELIRSGVFYPQAYVRQLIISGVTDKNGTLLDMERKRRHHRILKQLPGSSLFDILEEDVVAEEQQLHELMSTYSSERRLVLSELSSGQSFDANNRGEYTSSSYLRIPSGGTNHGGVPEQVEDVKVLVSSLLCFIYPHSAESEQNETKMNFQGSSTSTLTQVDTGEAKNGCEDCMRINGQKVDERTSPFFPLIQSDEEDVWWVRKGTELQESFKAEPALKSIKQTSRGRAKVVRKTQNLAQLATAKIEGSQGEASTSHLCESKLSCPHHKPSTDGDSGKDADHTRMTNLAEVGKSLKKLRLLERRSISVWLLKSVRQLVEGNETTACKASNSISSFSSQPDDKTVSKWRLGDEELMSILYILDTCCDLASAARFLVWLLAKIRGGMGTLGQVGRSAAHMKNRDNQVCQVGEAFVFSSLLRYENILLATDLLPEVLNASTNRNFVLGTARHPAPAAFPYTRYFLRKYRDVASVVRWEKNFRTTCDQRLLADLDNGRSIDGDFVSSSGVLGGEEIDDQVRQKLSGRGSRIIPNMKEIVQRQAEEIQRNLKEKKIPAAPKSPSFEKEDSYQIAHDTVLGLVECIRQNGGATPDGDPSAVASAVSAVASAVSAVVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRHTLHIHINSLCLLKEALGDRFSRVFEVALAVEASSAVTAAFAPPKVQRNQFQPSSETHDAYGNHTNEPLSTTGKGFVGRAGKVAAAISALVVGAVVHGAVSLERMIAVLKIKDGLEIQQVLRGLRPSTNGASRSAVTFKMDNSIEVLVHWFRILLGNCRTVYDGLIADILGESYVLALSRLQQKLPLSVVFPPAYSVFAIVRWRQYILSREDMQVYQSIANAINDITRHQPFRDICFRNTHQLYDLLAADVGDSEFAAMLETHCSDKNVRQLFMPLRGRLFLNALVDCKTPAVIQVDGSEPGEAKENELKLLSERLVQSLDTLQPAKFHWQWVELRLLLDEQALAEKLDKAEKSKIPMPILMTLADGLRKLSPNSESFTLSESEKGFTEIILSRLVARPDAAPLYSEVVHLLGKLQESLVVDVKWILQGQDAVLGRKSTRQQLLTIATRRGVPIKAQVWKPWGWSSLLTDVMANRSAKRKLEAAPIEEGEVVDDPADAKRPSKSTPNNVDRSVEAIRSNINKYVTEKAFAEFMLPCIDRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAKHVGLVPSGNDVSSNKSSGRKGIRGGSPNIGRRVTVGNDPTPPSASALQAIVWLRLQFIIRLLQVILADRGMRHTLAPAILSLLAARIIYEDADSPLPPASLIASRREVDSLLEPPMDVLLDRPSESLFERLLCVFHALLGNCKPSWMKSKPVSKPTVRASRDIPAFDNEAAVALQSALDHMELPGAIRRRIQAAMPILPPARHPSIQSQPPQLSLAALSPLQSTPSTSGPQQKSTSHSWVPTNISSRSKAVLPPQDPEMEVDPWTLLEDGTSCPATSSGSNSASGIAPDHSNLKACSWLKGAVRVRRTELTYIGSLDDDS
Length2198
PositionKinase
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.269
Instability index50.26
Isoelectric point8.44
Molecular weight242575.74
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22588
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.07|      11|      16|    1104|    1115|       1
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 1104- 1115 (16.66/14.36)	RNFvLGTARHPA
 1123- 1133 (18.40/10.42)	RYF.LRKYRDVA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      79.83|      25|      47|     957|     981|       2
---------------------------------------------------------------------------
  957-  981 (39.44/25.82)	KSLKKLRLLERRSISV.WLLKSVRQL
 1006- 1031 (40.39/26.65)	KTVSKWRLGDEELMSIlYILDTCCDL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      81.18|      25|     601|    1173|    1247|       3
---------------------------------------------------------------------------
 1216- 1247 (36.51/90.27)	PAAPKSPSfeKEDSYQIAHDtvlglVECIRQN
 1801- 1825 (44.67/ 8.76)	PADAKRPS..KSTPNNVDRS.....VEAIRSN
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.75|      21|      23|     291|     313|       4
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  283-  303 (41.85/28.26)	TEEPLVH..FKWWYMVRLVQWHL
  304-  326 (33.90/28.15)	TEELLVPsvLIEWLCYQLQERDS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.75|      15|      24|     155|     169|       5
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  155-  169 (27.05/19.64)	RRK.WAEALAQPNKRL
  181-  196 (22.70/15.01)	RRKsLFDVLTRCNVPL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.67|      18|      23|      37|      57|       6
---------------------------------------------------------------------------
   37-   57 (31.37/25.39)	PPNYPLNPrrqQQLAPYRLKC
   61-   78 (37.30/21.56)	PLNNKLGP...PDFYPQTPNC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      59.39|      20|      23|      96|     118|       7
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   98-  118 (32.80/32.77)	G.IEEAREIV...LSHiSYFCKPDI
  120-  143 (26.59/12.55)	GkCKEAGQVYgvpLSG.SLLIKPGV
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     151.28|      48|     601|     750|     805|       8
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  750-  805 (70.31/58.74)	SGQSFDAnnRGEYTSSsylriPSGGTNHGGVPeQVEDVKVLVSSLLCFIYPHSAES
 1360- 1407 (80.97/46.01)	SSETHDA..YGNHTNE.....PLSTTGKGFVG.RAGKVAAAISALVVGAVVHGAVS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     104.99|      31|      51|    2075|    2106|       9
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 2075- 2106 (51.77/39.21)	ILPPaRHPSIQSQPPQLSLAALS.PLQSTPSTS
 2129- 2160 (53.21/35.44)	VLPP.QDPEMEVDPWTLLEDGTScPATSSGSNS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      43.34|      13|      24|     552|     564|      10
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  552-  564 (22.71/14.55)	KFTGRRDSSQIHL
  578-  590 (20.62/12.43)	KLSRSKSSSRIAM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      51.11|      14|      49|     403|     416|      11
---------------------------------------------------------------------------
  403-  416 (26.55/20.70)	LPSFVAPDVYGRGA
  454-  467 (24.57/18.40)	LATLASPNVHARGA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.04|      29|     222|     597|     625|      12
---------------------------------------------------------------------------
  597-  625 (46.52/31.34)	SSLNDVSVAATKVGDSSGLRSNGKNEEEK
  820-  848 (51.52/35.60)	STLTQVDTGEAKNGCEDCMRINGQKVDER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.69|      26|      47|    1702|    1729|      13
---------------------------------------------------------------------------
 1702- 1729 (38.16/29.70)	VARPDAAPLYSEVVHLLGklQESLVVDV
 1752- 1777 (48.53/31.75)	IATRRGVPIKAQVWKPWG..WSSLLTDV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     103.15|      32|      49|     872|     904|      15
---------------------------------------------------------------------------
  872-  904 (48.04/38.07)	LQESFKAEPALKSIKQTSRGR.AKVVRKTqNLAQ
  922-  954 (55.12/38.82)	LCESKLSCPHHKPSTDGDSGKdADHTRMT.NLAE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.81|      13|      16|    1959|    1974|      16
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 1959- 1974 (17.22/17.91)	SLLAARiiyEDADSPL
 1978- 1990 (21.59/11.86)	SLIASR...REVDSLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.31|      10|     889|    1032|    1041|      20
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 1032- 1041 (18.92/10.62)	ASAARFLVWL
 1922- 1931 (18.39/10.10)	ASALQAIVWL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      27.54|       9|      21|     248|     262|      21
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  248-  262 ( 8.81/18.07)	LKeaHpsfkEQPSAG
  272-  280 (18.73/ 8.17)	LK..H....EAPSAG
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.20|      15|      19|    1475|    1489|      22
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 1475- 1489 (24.52/12.38)	ILGESY.VLALSRLQQ
 1496- 1511 (24.69/12.52)	VFPPAYsVFAIVRWRQ
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---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      64.36|      22|      25|    1603|    1627|      23
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 1606- 1627 (35.51/26.43)	EPGEAKEN..ELKLL..SERLVQSLD
 1630- 1655 (28.86/11.60)	QPAKFHWQwvELRLLldEQALAEKLD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22588 with Med12 domain of Kingdom Viridiplantae
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