<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22584

Description Uncharacterized protein
SequenceMDAAAAPGAAAGGQQQQQPAPPRAERLNGEVQSQLNLEGMRARAVGLYKAISRILEDFDAIARVNPSGSPKWQDVLGQFSMVSMELFNIVEDIKKVNKGFVVYPRNVNAENAAILPVMLSSKLLPEMEVEETTKREQLLSGITNLPVPSQMEKLKARIDMIANACETAERVIAECRKTHGLGARQGANLGPMLDKAQAAKIQEQESLLRAAVNYGEGLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNSGAYPKNTPAFSPNNVSAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPRSGTNMMNTPSPQQHLTPQQQRQKLMQASQQQQQQLRPSAAGMLAQSSVPQLQDLQGQAQQKVAGQQQMQYSQAQALSQFQNRQMQAARMQPGMSQSQLNQGNQLRSHLGQFTGAANSAMYTAAQASSNSQMMANIPGTMQTMQSQSMMPQMQFGLTGGHPQRSHQMMTDQMYGMGGANTTSMMGMQMQQQQQQQQQQQQQQQGLYGNMQGGGQSLQQQGMVGLQNQQQNQMQNQMQNQMQNQLQNQMPNPNFPQQRQQNQQ
Length573
PositionHead
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.763
Instability index58.07
Isoelectric point9.26
Molecular weight62520.62
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22584
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     712.24|     158|     159|     257|     415|       1
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   11-   87 (67.40/10.77)	............................................................................................AGGQQQQQPAPPRAERLNGEVQSQL.NLE.........G....MRARAV.G....LYKAISRILEDFDA....IARVNPSG.SpkwQDVL..GQF.sMVSMELF
  104-  263 (184.12/41.75)	PRNVNAENAailPVMLS..SKLLPEMEVEETTKREQLLSGITNLPVPSQ..mEKLKARIDMI.........aNACETAERVIAECRKTHGLGA..RQGANLGP....MLDKAQAAKIQEQEsllraavnyG....EGL.RVSGdQRQMHSSLPSHL.......MEVLATGDGA.H...NFGDNSGAY.pKNTPAFS
  264-  424 (269.81/66.16)	PNNVSAQGN...PMQASG.GQLLGRSAPSPGTAGTPNFENVSTPPMPYA...NSPRSGTNMM..........NTPSPQQHLTPQQQRQKLMQASQQQQQQLRPSAAGMLAQSSVPQLQDLQ.........G....QAQQKVAG.QQQMQYSQAQALSQFQNrQMQAARMQPGM.S...QSQLNQGNQlrSHLGQFT
  425-  572 (190.92/43.56)	GAANSAMYT...AAQASSnSQMM...ANIPGTMQTMQSQSM.MPQMQFGltgGHPQRSHQMMtdqmygmggaNTTSMMGMQMQQQQQQQ..QQQQQQQQGLYGNMQGG.GQS....LQQ.Q.........GmvglQNQQ.....QNQMQ.NQMQ..NQMQN.QLQNQMPNPNFpQ...QRQQNQ............
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22584 with Med8 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) DAAAAPGAAAGGQQQQQPAPPRAERLNGEVQ
2) GLRVSGDQRQMHSSLPSHLMEVLATGDGAHNFGDNSGAYPKNTPAFSPNNVSAQGNPMQASGGQLLGRSAPSPGTAGTPNFENVSTPPMPYANSPRSGTNMMNTPSPQQHLTPQQQRQKLMQASQQQQQQLRPSAAGMLAQSSVPQLQDLQGQAQQKVAGQQQMQYSQAQALSQFQNRQMQAARMQPGMSQSQLNQGNQLRSHLGQFTGAANSAMYTAAQASSNSQMMANIPGTMQTMQSQSMMPQMQFGLTGGHPQRSHQMMTDQMYGMGGANTTSMMGMQMQQQQQQQQQQQQQQQGLYGNMQGGGQSLQQQGMVGLQNQQQNQMQNQMQNQMQNQLQNQMPNPNFPQQRQQNQQ
2
217
32
573










Molecular Recognition Features






MoRF SequenceStartStop




1) QQQGLYGN
512
519