<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22577

Description Uncharacterized protein
SequenceMDAACDSPEPEQSSSESGEKMKKVYVAVGAGSDSKAMVLWALHKFPRDPTATSLVLLHVYPQPKLIPIMGARIPASQVQEQELTAYKKMELQTISNTLDQHLLLCAQEKVQAEKLVVESEDVAEGLVQLITAHHITALVMGAAADKHYSKEMRALKSKKARAVEQRAEPSCKIWYICKGTLVYRRNAVPLGHEAMPEGSQESAAQQFSVDRSTSLSETWCVSSTWLHKPHARLQMERTSPRGSDDNGKEIVKEFDEADIKFQHMLRELESVRKQAYEEKHGREKAEQDLFEAFQRARVSENMYLGEVKQKNEIEEKLATVMEEVESLTETTDGLCAKLQEERKKRSALEKRTAHSDRIIKDLLLQRDKAVREVEALHAKKGESSATAEGTMHITELSSSEIKDATNNFDHSLKIGESVYGSVYKGFLRHTNVAIKKLNLESTQPQSQSQSQFNQEIEILSRVRHPNLVTLIGACKDAQALVYEYMPNGSLDDRLACKDNSKPLSWQLRTRIISHVCSALIFLHSNKPHSIVHSDLKASNILLDGNNVAKLSGFGVCRMVTDEFRDTTTLYRHTHPKGSFVYIDPEYVMTGDLTPLSDVYSFGIVLLRLLTGRPGFGLLRDVQRAVEKGCLGAILDSSAGGWPAMQAEQLARVGLKCCEIRRKNRPDLQNEVWTVLEPMLKPASIMLCSLSFKSVSEDLGGVPPYFICPILQDVMREPLIAADGFTYEAEAIREWIDSGHHTSPMTNLELLHRDLLPNHALRSAIQEWLQTDA
Length772
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.403
Instability index45.25
Isoelectric point6.22
Molecular weight86535.76
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
cytoplasm	GO:0005737	IBA:GO_Central
cytosol	GO:0005829	IBA:GO_Central

GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein serine/threonine kinase activity	GO:0004674	IBA:GO_Central
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process
signal transduction	GO:0007165	IBA:GO_Central









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22577
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.92|      39|     218|     131|     173|       1
---------------------------------------------------------------------------
  131-  173 (54.22/52.03)	TAHH...ITALVMgaAADKHYsKEMRALKSKKARAvEQRAEPSCKI
  352-  393 (59.70/40.08)	TAHSdriIKDLLL..QRDKAV.REVEALHAKKGES.SATAEGTMHI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      82.82|      25|      27|     604|     629|       2
---------------------------------------------------------------------------
  604-  629 (37.89/31.58)	VLLRLLTGRPGFGlLRDVQRAVEKGC
  633-  657 (44.93/32.58)	ILDSSAGGWPAMQ.AEQLARVGLKCC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.30|      15|     377|     185|     199|       4
---------------------------------------------------------------------------
  185-  199 (28.85/17.95)	RNAVPLGHEAMPEGS
  475-  489 (28.45/17.61)	KDAQALVYEYMPNGS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22577 with Med32 domain of Kingdom Viridiplantae
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