<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22570

Description Uncharacterized protein
SequenceMVEGMASERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHGPYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPGSSQNHQNRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAEAVAVSFAQSSVSLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTPAVISSISGTVQPIGAQQLVQNTALGSFGSNTSTVSGQGGIGTNQNMINNLGTTAISSMPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHPNGQQPSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASDTLASDWPETMQIVRLIAQEHMNNKQYVGKADFLVFRTLNQHGFLGQLQEKKLCAVIQLPSQTLLLSVSDKAGRLIGMLFPGDMVVFKPQVSTQQPQMQPQQQQQQLQQQQQQIQQQQQQLQQLQQQQLQQHQMQMQPQGQQLQQQQQMQQMQQQQQQMQQMQHQQQQQQQQIQQQQQMQQQQQQIQQQQQMQQQQQQQQQQQMQQMQQQQQQQPQQLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKIAPQGPGNMSGGGYLS
Length802
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.505
Instability index54.26
Isoelectric point8.42
Molecular weight87383.93
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22570
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     276.54|      27|      27|     682|     708|       1
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  632-  653 (44.11/ 7.04)	.QQPQMQP..QQQQQQLQQ...QQQQIQ
  654-  680 (55.47/10.40)	QQQQQLQQL.QQQQLQQHQMQMQPQGQQ
  682-  708 (64.47/13.05)	QQQQQMQQM.QQQQQQMQQMQHQQQQQQ
  709-  735 (57.41/10.97)	QQIQQQQQM.QQQQQQIQQQQQMQQQQQ
  737-  764 (55.08/10.28)	QQQQQMQQMqQQQQQQPQQLQQQPQMVG
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     201.37|      44|      46|     396|     439|       2
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  270-  310 (42.87/15.67)	............SN............ATPSVNGTMMGrqptanvK...........VEPTTIPPMVSA...................PAFSHMTP..
  312-  386 (39.66/13.96)	............SNVASQ.GVsamqTSSPSIISQETN.......VaneilqehkplVNPI..QQQVRPggpanvsilnnlsqhrhslTAATSMGPNM
  387-  438 (68.57/29.41)	G...atpiqvhmSNMISS.GM....TSTPAVISSISG.......T...........VQPIGAQQLVQN...................TALGSFGSNT
  439-  487 (50.27/19.62)	StvsgqggigtnQNMINNlGT....TA....ISSMP........T...........MMP..TPGMVQQ...................TGVNALSANN
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     110.87|      21|      86|     495|     515|       3
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  495-  515 (38.87/22.17)	LAQ.HP.NGQ.QPSKY...VKIWEGTL
  529-  549 (30.53/15.71)	LEG.YR.SGT.ASDTL...ASDWPETM
  555-  572 (22.43/ 9.44)	IAQeHM.NNK.Q...Y...VGKAD.FL
  577-  602 (19.04/ 6.81)	LNQ.HGfLGQlQEKKLcavIQLPSQTL
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.61|      27|      50|     142|     189|       4
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  114-  140 (45.61/12.47)	ILQGSPGSSQNHQNRELQKH.CLLVAAS
  149-  176 (43.00/50.16)	VYRPSVQSSDHKKSNEATKEsCLADAEA
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      98.60|      32|      50|     180|     215|       6
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  180-  215 (49.77/37.19)	SFAQSSVSLSVVSPKQL.P..TLKAIYNAgkrnPQASDP
  232-  266 (48.83/27.24)	SFMEARTALSHPLPGNLvPnhTITKMDTA....PAATVP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22570 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNM
2) NMINNLGTTAISSMPTMMPTPGMVQQTGVNAL
3) QLQQQPQMVGTGMGQQQFMQGHGRAVQMMQGKIAPQGPGNMSGGGYLS
239
452
755
398
483
802










Molecular Recognition Features






MoRF SequenceStartStop




NANANA