<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22568

Description Uncharacterized protein
SequenceMAEAGGVGRSGEDDQGGEEERGGGAAAAEVQVYCAVGKEAGKEWRANLRWVLANFPRSRHRLVLAHVHRPPHRINMMGAWVPVSQLAEHEVAAYSKLEEERATKALDVLIDICASQRVHARKVIVSGDDAARGLVQLVDDHGVAELVMGAAADRGYTRKLRAPKCKKAVTVQRKANPSCRIWFVCKGNLICTREVSQELNRAEPSTASSSPRSVASDYSRSKSSPPRLTIHGDGDGELLGMHHDSPDPMMAASLRRTPSRDDSDNATDHSIEDFAHEGAAEGGSSAVVQLLQDVEEDPPTPSHDGSASEEAGDMEDALYEKLKDAIMEAGSLRHEAYEETRRRQKADRDLANASMMARDAESSYHGEARRRKEMEESLARERAAMEQERRDLDALLEKIREVDDRSAELELQITDSGRVMSELDVRMSESCSVLDALRRERRGEGPAADEESMPAVDDGDQSVSFLRLGLSELEEATDRFDESAVIGGARAGSRGRVYRGSLRGMSVAVKMICPDVAVDEAPFGRAVDAIARARHPNIVALVGACPGARAVVHELVPGGSLEDRLGREAPPLPWHARCGTAYRTCSALAYLHSTATVHGDVRPENILLEDERCSSSKLAGLGMPGLVASPQLPTGVALPYVEPRYLATGELTPQCDVHALGVVLLRLVTGMPAFAAKKAAQKAADGSTPWHEVVDATAGGWPMERATEVALLGLKCCDAVEAGGPRRAAELLDEALSVLEAATDATPGRTWSSLSASTASDSGGAPSYFLCPILKEVMRDPQIAGDGFTYEAEAMKEWLGSGHDTSPMTNIKLPTEELMPNHALRAAIQEWRHTRPITFHRYQL
Length844
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.427
Instability index49.54
Isoelectric point5.36
Molecular weight91281.47
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22568
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      76.16|      21|      40|     257|     277|       1
---------------------------------------------------------------------------
  257-  277 (38.45/24.43)	TPSRDDSDNATDHSIEDFAHE
  300-  320 (37.71/23.80)	TPSHDGSASEEAGDMEDALYE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     217.16|      45|      47|     587|     631|       2
---------------------------------------------------------------------------
  550-  577 (40.58/16.05)	........AVVH..ELVPGG.SLED......RL.GR..EAPPLPW..HAR
  587-  631 (76.53/36.17)	ALAYLHSTATVH.GDVRPENILLEDERCSSSKLAGL..GMPGLVA..SPQ
  637-  681 (54.52/23.85)	ALPYVEPRYLAT.GELTPQC....DVHALGVVLLRLvtGMPAFAAkkAAQ
  710-  748 (45.53/18.82)	ALLGLKCCDAVEaGGPRRAAELL.DEALSVLEAATD..ATPG........
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.17|      26|      40|     392|     429|       3
---------------------------------------------------------------------------
  392-  424 (34.41/46.77)	LDALL............EKIREVDD..RSAE.LELqitdsGrvMSELD
  434-  474 (27.76/ 9.96)	LDALRrerrgegpaadeESMPAVDDgdQSVSfLRL.....G..LSELE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     154.92|      47|     550|     205|     254|       6
---------------------------------------------------------------------------
  205-  254 (77.66/60.52)	STASSS...PRSVASDYSRSKSSPPRltIHGDG.......DGELLGMHHDSpDPMMAASL
  757-  813 (77.26/49.12)	STASDSggaPSYFLCPILKEVMRDPQ..IAGDGftyeaeaMKEWLGSGHDT.SPMTNIKL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      85.04|      25|      30|     322|     351|       7
---------------------------------------------------------------------------
  327-  351 (42.24/33.08)	MEAGSLRHEAYEETRRRQKADRDLA
  355-  379 (42.80/21.87)	MMARDAESSYHGEARRRKEMEESLA
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22568 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) EAGSLRHEAYEETRRRQKADRDLANASMMARDAESSYHGEARRRKEMEESLARERAAMEQ
2) SQELNRAEPSTASSSPRSVASDYSRSKSSPPRLTIHGDGDGELLGMHHDSPDPMMAASLRRTPSRDDSDNATDHSIEDFAHEGAAEGGSSAVVQLLQDVEEDPPTPSHDGSASEEAGDMEDALYEKLKDA
328
196
387
325










Molecular Recognition Features






MoRF SequenceStartStop




1) ALYEKLK
317
323