<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22567

Description Uncharacterized protein
SequenceMVEGMASERQLVVVVEGTAALGPYWPAIAAEYVEKIVRSFCSTELSGQKLAGVPPELALVVFHTHGPYSAFIVQRSGWTKDMDAFLSWLSGISFSGGGFSEAAICEGLAEALMILQGSPGSSQNHQNRELQKHCLLVAASNPYPLPTPVYRPSVQSSDHKKSNEATKESCLADAEAVAVSFAQSSVSLSVVSPKQLPTLKAIYNAGKRNPQASDPSVDHAKNPHFLVLLSESFMEARTALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNMISSGMTSTPAVISSISGTVQPIGAQQLVQNTALGSFGSNTSTVSGNSNIAVSSSLANIQSNMAMGQSVPSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSMPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHPNGQQPSKYVKIWEGTLSGQRQGQPVFICKLEGYRSGTASDTLARNDADRAPHSPRAYEQQAVCWQGRLSSISNIESAWFPRTTTREEIVCSDSATFTNFAVVSV
Length641
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.160
Instability index46.50
Isoelectric point6.76
Molecular weight67334.32
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22567
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.65|      41|      49|     507|     554|       1
---------------------------------------------------------------------------
  514-  554 (72.82/46.23)	QQTGVNALSANNSSAMNMPLAQHPNGQ...QPSKYVK...IWEGTLS
  560-  606 (63.82/27.62)	QPVFICKLEGYRSGTASDTLARNDADRaphSPRAYEQqavCWQGRLS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     174.67|      37|      39|     249|     285|       2
---------------------------------------------------------------------------
  249-  282 (56.46/22.96)	.......................VPNHTITKMDTAPAATVPGPPSNATP.S....VNGTM.M...G
  283-  324 (50.84/20.00)	RQP...............tanvkVEPTTIPPMVSAPAFSHMTPISNVAS.Q....GVSAM.Q...T
  365-  402 (37.93/13.21)	.......................ILNNLSQHRHSLTAATSMGPNMGATPiQ....VHMSN.MissG
  403-  463 (29.44/ 8.74)	MTStpavissisgtvqpigaqqlVQNTALGSFGSN.TSTVSGNSNIAVS.SslanIQSNMaM...G
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      74.14|      22|      35|     114|     135|       3
---------------------------------------------------------------------------
  114-  135 (40.15/27.92)	ILQGSPGSSQNHQNRELQKH.CL
  149-  171 (34.00/22.38)	VYRPSVQSSDHKKSNEATKEsCL
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22567 with Med25 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) ALSHPLPGNLVPNHTITKMDTAPAATVPGPPSNATPSVNGTMMGRQPTANVKVEPTTIPPMVSAPAFSHMTPISNVASQGVSAMQTSSPSIISQETNVANEILQEHKPLVNPIQQQVRPGGPANVSILNNLSQHRHSLTAATSMGPNMGATPIQVHMSNM
2) PSMAQGGLMAGPQSGQGGIGTNQNMINNLGTTAISSMPTMMPTPGMVQQTGVNALSANNSSAMNMPLAQHP
239
467
398
537










Molecular Recognition Features






MoRF SequenceStartStop




NANANA