<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22552

Description Uncharacterized protein
SequenceMQRYAGAGNSNSSGFSGGPASAGGRDSSRLDVSPYAPPNYPLNPRRQQQLAPYRLKCDREPLNNKLGPPEFYPQTPNCPEETLTKEYVQSGYKETVEGIEEAREIVLSHISYFCKPDIVGKCKEALKKRLRAINESRAQKRKAGQVYGVPLSGSLLIKPGVYPEQRPCNEDSRRKWAEALAQPNKRLRLLSEHVPHGYRRKSLFDVLTRCNVPLLRATWFVKVTYLNQVRPTSSSISTGASDNQRSNQWTKDVVEYLQQLLDEFNLKEAHPSFKEQPSAGLISGATQVKLKHEAPSGGDTEEPLVHFKWWYMVRLVQWHLTEELLVPSVLIEWLCYQLQERDSVEALELLLPIVLGLVETITLSQTYVRMFVEILVRRLSDASAVDNPKRSSISSVIAELLRYMVLAVPDTFVSLDCFPLPSFVAPDVYGRGALLKITGGGEMSSSKRRDVYRYLSCGYAVCSIQRRASDLATLASPNVHARGAAKVVQALDKALVTGNLTMAYSSLFNDLSDALMEERWIKEVSPCLQSSLMWIGTVELSLICSIFFLCEWATCDYRDCRTSPSQNVKFTGRRDISQIHLAVSILKSKMSEMNKLSRSKSSSRIAMNNIGKGSSLNDASVAATKVGDSSGLRSNGKNEEEKKERKDIFESPGPLHDIIVCWLDQHEVSSAAGFKRVDVLIIELIRSGVFYPQAYVRQLIISGVTDKNGTLLDTERKRRHHRILKQLPGSSLFDILEEDVVAEEQQLHEVMSTYSSERRLVLSELLSGQSFDANNRAEYTSSSYLRIPSGGTNLGGVPEQVEDVKVLVSSLLCFIYPHSAESEQNETKMNFQGSSTSTLTQVDTGEAKNGCEDCMRINGQKLDERTSPFFPLIQSDEEDVWWVRKGTELQESFKAEPALKSIKQTSRGRAKVVRKTQNLAQLATAKIEGSQGEASTSHLCESKLSCPHHKPSTDGDNGKDADHMRMANLAEVGKSLKKLRLLERRSISVWLLKSVRQLVEGNETTACKASNSISSFSSQPDDKTASKWRLGDEELMSILYILDTCCDLASATRFLVWLLAKIRGGMGTLGQVGRSAAHMKNRDNQVCQVGEAFVFSSLLRYENILLATDLLPEVLNASTNRNFVLGTARHPAPAAFPYTRYFLRKYRDVASVVRWEKNFRTTCDQRLLADLDNGRSIDGDFVSSSGVLGGEEIDDQVRQKLNGRGSRIIPNMKEIVQRQAEDIQRNLKEKKIPAAPKSPSFEKEDSYQIAHDTVLGLVECIRQNGGATPDGDPSAVASAVSAVVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRHTLHIHINSLCLLKEALGDRFSRVFEVALAVEASSAVTAAFAPPKVQRNQFQPSSETHDAYGNHTNEPLSTSGKGFVGRAGKVAAAISALVVGAVVHGAVSLERMTAVLKIKDGLEIQQVLRGLRPSSNGASRSAVTFKMDNSIEVLVHWFRILLGNCRTVYDGLIADILGESYVLALSRLQQKLPLSVVFPPAYSVFAIVRWRQYILSREDMQVYQSIANAINDITRHQPFRDICFRNTHQLYDLLAADVGDSEFAAMLETHCSDKNVRQLFMPLRGRLFLNALVDCKTPAVIQVDGSEPGEAKENELKLLSERLVQSLDTLQPAKFHWQWVELRLLLDEQALAEKLDKAEKSKIPMPILMTLADGLRKLSPNSESFTLSESEKGFTEIILSRLVARPDAAPLYSEVVHLLGKLQESLVVDVKWILQGQDAVLGRKSTRQQLLTIATRRGVPIKAQVWKPWGWSSLLTDVMANRSAKRKLEAAPIEEGEVVDDPADAKRPSKSTPSNIDRSVEATRSNINKYVTEKAFAELMLPCIDRSSPEFRSIFAGELIKQMGTVSEHIKAISRNGAKHVGLVPSGNDVSSNKSSGRKGIRGGSPNIGRRVTVGNDPTPPSASALQAIVWLRLQFIIRLLQVILADRGMRHTLAPAILSLLAARIIYEDADSPLPPASLIASRREVDSLLEPPMDVLLDRPSESLFERLLCVFHALLGNCKPSWMKSKPVSKPTVRASRDIPAFDNEAAVALQSALDHMELPGAIRRRIQAAMPILPAARHPSIQCQPPQLSLAALSPLQSTPSTSGPQQKSTSHSWVPTNISGRSKAVLPPQDPEMEVDPWTLLEDGTSCPSTSSGSNSASGIAPDHSNLKACSWLKGAVRVRRTELTYIGSLDDDS
Length2208
PositionKinase
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.282
Instability index50.53
Isoelectric point8.66
Molecular weight243986.59
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
transcription coregulator activity	GO:0003712	IEA:InterPro

GO - Biological Process
regulation of transcription by RNA polymerase II	GO:0006357	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22552
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     501.78|     164|     618|    1167|    1339|       1
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 1167- 1339 (255.85/189.10)	LLADLDNGRSIDGDfVSSSGVLGGEEIDDQVRQKlngRGSRIIP.NMKEIVQRQAEDIQRNLKEKK.....IPAAPK.SPSFEKEDSYQIAHD..TVLGLVECIRQNG....GATPDG.DPSAVASAVSAVVVNAGHVIAKHLDFAGGNYHGVASIGNSLSFVRhtLHIHINslcLLKEALGDRFSR
 1783- 1960 (245.93/156.77)	LLTDVMANRSAKRK.LEAAPIEEGEVVDDPADAK...RPSKSTPsNIDRSVEATRSNINKYVTEKAfaelmLPCIDRsSPEFRSIFAGELIKQmgTVSEHIKAISRNGakhvGLVPSGnDVSSNKSSGRKGIRGGSPNIGRRVTVGNDPTPPSASALQAIVWLR..LQFIIR...LLQVILADRGMR
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.36|      14|      51|     420|     433|       2
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  420-  433 (26.54/17.63)	LPSFVAPDVYGRGA
  471-  484 (22.81/13.91)	LATLASPNVHARGA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.49|      20|     618|     376|     395|       3
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  376-  395 (33.70/17.61)	VRRLSDASAVDNPKRS.SISS
  995- 1015 (29.79/14.77)	VRQLVEGNETTACKASnSISS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      34.96|      11|      49|     348|     360|       4
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  323-  333 (20.91/14.57)	ELLVPSV..LIEW
  348-  360 (14.05/16.53)	ELLLPIVlgLVET
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     143.12|      32|      49|     889|     921|       6
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  862-  887 (39.03/16.59)	LDE..RTSPFFPLI.QSDEEDVWWVRKGT...
  889-  920 (49.17/23.57)	LQESFKAEPALKSIKQTSRGRAKVVRKTQNLA
  939-  970 (54.92/24.22)	LCESKLSCPHHKPSTDGDNGKDADHMRMANLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.79|      32|      53|    1452|    1484|       7
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 1452- 1484 (53.53/35.12)	VTFKMDNSIEVLVHWFRILLG.NCRTVYDGlIAD
 1505- 1537 (53.26/30.75)	VVFPPAYSVFAIVRWRQYILSrEDMQVYQS.IAN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.27|      28|      53|    2087|    2116|       8
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 2087- 2116 (46.80/30.42)	PaaRHPSIQCQPPQLSLAALS.PLQSTPSTS
 2142- 2170 (47.48/25.45)	P..QDPEMEVDPWTLLEDGTScPSTSSGSNS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      35.07|      11|      16|    1121|    1132|       9
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 1121- 1132 (16.66/12.85)	RNFvLGTARHPA
 1140- 1150 (18.40/ 9.35)	RYF.LRKYRDVA
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.30|      20|      23|    1609|    1628|      11
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 1609- 1628 (32.69/22.38)	VIQVDGSEPGEAKEN..ELKLL
 1633- 1654 (30.61/20.39)	VQSLDTLQPAKFHWQwvELRLL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22552 with Med12 domain of Kingdom Viridiplantae
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