<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22551

Description Uncharacterized protein
SequenceMAANEGDGTGAGAAPTVVGLALGGSESSAYVLQWALANFARDDAAPPAFKLIHVLTPVLAVPTPMGGRLPIDEVKSAVVDDYLGKKWIKKQQMLFRCKDTCDENKVEAQVLLVEGNDVADTISSLVSQYQIQILVVGNSSSMIPFTRMSSASRKSSKICKSVPSFCTAYVVSKDGFSSVYASESESGSPSGSLVPKGNSGSSETEEFIDSSISDLDDSSGRGLSGFPSLPRSNLASENLESVSSVEGFNLYDYVTGNASVYANKDRRITPCTGAQSSISSQFQGSDKVPTKESSLLGFMLSDNKGSDKVPTKQKSLLGLMLSENKDDISTELEKLKLELGHIQGAYKLVQDELVDASHQVNELAARRMEVEAQLSEIQARVDKANDDVQEQMAQRLLAEEAATQLKDLVRAEVMQKNRLLAKASKDADRKARLEKLLVLQGDSYSTFTWEEIDSATASFSESLKIGTGSNGTVYKGHLNHLDVAIKVLHSNDSSSTKHFNQELEVLSRIRHPHLLMLLGACPDKGCLVYEYMENGSLADRLQRRKGTPAIPWVDRFRIAWEIASALVFLHSTKPSPIIHRDLKPENVLLDSNLVSKIGDVGLSTLMPHKETLSNRTVYKRTGLAGTLFYLDPEYQRSGQVSVKSDTYALGMVILELLTARPPMGLPELVERAVEDGQITDVLDTSAGDWPVKEAHELARLGLNCLEMRSKDRPDLKSVVAVDLERLKHSTAVPGLAGPPSHFMCPILKKVMKKPCLAADGYSYEHDAIVMWLCDQNTSPVTKAQLRDKKLVPNLSLMSAIASWMAQGGRPYLSE
Length814
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.255
Instability index37.64
Isoelectric point5.78
Molecular weight88674.85
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22551
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      78.43|      20|      20|     284|     303|       1
---------------------------------------------------------------------------
  284-  303 (40.47/24.89)	GSDKVPTKESSLLGFMLSDN
  305-  324 (37.96/22.91)	GSDKVPTKQKSLLGLMLSEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.03|      21|      24|     469|     489|       2
---------------------------------------------------------------------------
  469-  489 (36.49/27.93)	SNGTVYKGHLNH.LDVAIKVLH
  490-  511 (31.54/23.08)	SNDSSSTKHFNQeLEVLSRIRH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      81.13|      25|      25|     391|     415|       3
---------------------------------------------------------------------------
  343-  390 (18.46/ 8.88)	QGAYKLVQD.....ElvdASHQVNELAarRMEVeaqlseiqarvdkanddvQE
  391-  415 (40.59/28.67)	QMAQRLLAE.....E...AATQLKDLV..RAEV..................MQ
  416-  440 (22.08/12.12)	K..NRLLAKaskdaD...RKARLEKLL.....V..................LQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      94.02|      22|      46|     172|     193|       4
---------------------------------------------------------------------------
  172-  193 (35.29/17.95)	SKDGFSSVYASE..SESGSPSGSL
  195-  218 (26.70/11.88)	PKGNSGSSETEEfiDSSISDLDDS
  219-  239 (32.03/15.65)	SGRGLSG.FPSL..PRSNLASENL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     144.55|      44|     138|     514|     563|       5
---------------------------------------------------------------------------
  514-  563 (72.41/59.76)	LLMLLGACPDKGC..LVYEYMENGSLADRLQRRKGTpaipWvdRFRIAWEIA
  653-  698 (72.14/43.86)	ILELLTARPPMGLpeLVERAVEDGQITDVLDTSAGD....W..PVKEAHELA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      78.50|      18|      20|      99|     116|       6
---------------------------------------------------------------------------
   81-   98 (29.46/23.06)	DYLGK.....KWIKKQQMLFRCK
   99-  116 (28.81/22.38)	DTCDE.....NKVEAQVLLVEGN
  117-  138 (20.23/13.39)	DVADTisslvSQYQIQILVV.GN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22551 with Med32 domain of Kingdom Viridiplantae
Unable to open file!