<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22540

Description Uncharacterized protein
SequenceMSTEIEEEDSGETAPETEAPGVSTVAIAVSGSRSSRHALKWALDKFVPGGRVLFRILHVRPPITMVPTPMGNYIPVSQVRDDVASAYREELEWQARNMLLPYKKMCAQRQVEAEAVLLESDDVPAAISEEIGKFNIGKLVLGSSSRSIFRRKLKGSKTATKISECIPSFCTAYVVSKGKLSFVRSATSDACETPKTISLSTVSSPSSRSLSSAPSECADRNGAAAVLFRQSSRSSQRDHALANINRRASPSGSGGSEISYHADTTLITNSHSIASGAQLSSSSSGDSVYKSFRRDSSPDIPDLQAAVSEIATNLKHSHDQDDLKLQIESMKVKLRHLQKLHECAHTEPVDSTQKLHNNLGIQRVEPEIKLREIDLTEEMVRRLLRRMEREEEEVAEREAQPIQTSSGQKATEGDGDHQNAGEINTGLKNAGRCLTEYNRYSWEHIQAATSSFSSDLVIGKGTYGTVYKAKFQHSVAAVKVLNSLEGFGTQQLQQELEVLGKIRHPHLLLLLGACPERGCVVYEYMESGSLDDALHHRRNGTPPLAWYDRVRVAWEVATAVAFLHSARPDPIIHRDLKPANILLDRNLSSKVGDVGLSTALLHHSGAGGGGGQQQSTMVRNTTPVGTFCYIDPEYQRTGAVSAKSDVYALGVVVLQLLTGRTSPLGLAHAVETALEEDGGDSFAEMLDVTAGQWPPEEARELAALALQCAEMRRRDRPGLREHILPALERIKDVAARAARETKALLLRTASSSAAPGHFLCPILQEIMEDPCVAADGYTYDRKAIETWVSMKDKSPMTNLRLLSKSLIPNHSLRSAIMDWSSKNR
Length824
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.381
Instability index56.73
Isoelectric point6.62
Molecular weight90124.75
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:UniProtKB-UniRule
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22540
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      92.75|      28|      35|     516|     549|       1
---------------------------------------------------------------------------
  520-  549 (47.99/39.83)	VVYE......YMESGSLDDALHhrRNGTPPLAWYDR
  552-  585 (44.76/20.96)	VAWEvatavaFLHSARPDPIIH..RDLKPANILLDR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      57.46|      16|      91|     203|     218|       2
---------------------------------------------------------------------------
  203-  218 (29.23/17.03)	SSPSSRSLSSAPSECA
  296-  311 (28.23/16.20)	SSPDIPDLQAAVSEIA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.21|      32|      37|     698|     734|       3
---------------------------------------------------------------------------
  698-  734 (47.82/36.36)	ARELAALALQCAemRRRDRPGlreHIL.PALERI.KD..VA
  738-  773 (42.39/20.81)	ARETKALLLRTA..SSSAAPG...HFLcPILQEImEDpcVA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.79|      11|      39|      81|      91|       4
---------------------------------------------------------------------------
   81-   91 (19.36/12.37)	DDVASAYREEL
  121-  131 (19.43/12.45)	DDVPAAISEEI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      68.72|      22|      34|     320|     342|       5
---------------------------------------------------------------------------
  320-  342 (32.07/27.21)	QDDLKLQIESMKVKLRHLQkLHE
  356-  377 (36.65/25.94)	HNNLGIQRVEPEIKLREID.LTE
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22540 with Med32 domain of Kingdom Viridiplantae
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