<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22512

Description Uncharacterized protein
SequenceMMQQSQATAAVAAPAAAARAHEPAGGDAPPKQVAQAMERLGRAGRIIADIRLGADRLLEALFVAASAPPDSAQQQIERNEEVVAKEEVSMHRHFDDLRALGRQLEESGVLNGALKARGNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKAFTDQKRRFFPHLEDEVLNHLHDGESGIAKRPRMPAGNGELEEKTLSEILKNLENEVPNMKISTYRRLDWSKRASSLASLMDDDFVDPSKELNLQNMGKSRPGSVTTPIDQVAVIELLVPSIFRVVVSLHPAGSVDPDAVAFFSPTEGGSYLHARGLSVHHVFKHVTEHADKALQYFISVEPSKALSILLHWIADYQTLFTKLCSKCRRLLLMDKSLALLLPPVHRPYHQISSIGSDHQEAYHIGCSSYDA
Length411
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.250
Instability index45.67
Isoelectric point6.66
Molecular weight45065.83
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22512
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     246.59|      81|      91|      85|     171|       1
---------------------------------------------------------------------------
   85-  171 (128.05/91.64)	KEEVSMHRHFDDLRALGRQLEESGvlNGALKARGNSWGL.HMPLVCPDGAVVAY...AW.KR..QLAGQAGASAVDRTR.LALKAFtdQKRRffP
  174-  262 (118.54/69.11)	EDEVLNHLHDGESGIAKRPRMPAG..NGELEEKTLSEILkNLENEVPNMKISTYrrlDWsKRasSLASLMDDDFVDPSKeLNLQNM..GKSR..P
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      45.05|      12|      37|      28|      39|       2
---------------------------------------------------------------------------
   28-   39 (22.42/12.01)	APPKQVAQAMER
   67-   78 (22.64/12.19)	APPDSAQQQIER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      65.34|      19|     100|     277|     298|       3
---------------------------------------------------------------------------
  277-  298 (29.41/25.23)	LLVPSIFRvvvSLHPAGSVDPD
  379-  397 (35.93/22.62)	LLLPPVHR...PYHQISSIGSD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22512 with Med27 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MMQQSQATAAVAAPAAAARAHEPAGGDAPPKQVAQA
1
36










Molecular Recognition Features






MoRF SequenceStartStop




NANANA