<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22502

Description Uncharacterized protein
SequenceMASTGGGTGGGRHWLEDEAPDLRSRIRQTLTSKLARYYQPRYAPDSQEAQRFVANFEEVAFRGTNSKEDYMRNISSKLLIMEKKTSGLLERRMQSRSQLRLANAAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQQMVYPRNKNLQTEVEQKHPGVMKILDQRPKFQPKEITTVGPGVSLWQMQSGASQSQSQHASRQAQTTNYVGCSPPSVSKPAGGPNSLQNHLLGQNGSSVGRQQPQLTSMNQRSSRANQQEMGMQKYQMLGAQQTDISKMQPSQLGGWNNQKDTRKTNLLQSSVKASEREPMTPPLQQIAGAQQSTLLCQSSQNTAMMGSAREYDLIEGMFSQIKSWKDAYFSQFVELERRVVIPTLTEEQFLSLPAAKANEYKRKAYAKRSIRKILNFLLLEKSDVNEGLKLDFPKYKEDVQKLVAYIERGKAHNAEMNTGYQLPNCREQPQVINLPGNASSTSGGKSRQQKQPADTSILQSRQTYMARTPPPREQSNGNHFSSSMLESLTPSPVANPVIAPASRCDPLIPMDVDSISAFLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGAGDRTSVTEKPIDRLMAAIRSSSPAALRSSANSIWSVLSMSDTIPHGQIGTVLDGTSSQQQRGGSNTARKMKRVFNDTAAHSESLPLGSMDGSCMTFECDASDSGSSSEQNIKRPKTQNVNDALLKEIKSINDTLIDTVVSISMDGIAPYDGGTTIKLSYSAVSLSPTVKSLFATSEMSLVLPVKLFVPADYPSSSPVPINDEGDEVPRRNSTTISASVDVAFRHALRGLLEPWSIEAVARAWDACVRKAVTQFAHRLGGGTVNSIFGGWERCTAA
Length874
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.576
Instability index58.70
Isoelectric point9.39
Molecular weight95051.02
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22502
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     274.66|      52|      54|     157|     208|       1
---------------------------------------------------------------------------
  108-  152 (64.17/31.62)	LQGGNPSV......RP..EAGMMATPGPtS.QPMTPQTSGLVPNQQMVYPRNKN
  157-  208 (85.71/44.88)	VEQKHPGVMKILDQRPKFQPKEITTVGP.G.VSLWQMQSGASQSQSQHASRQAQ
  213-  261 (74.92/38.23)	VGCSPPSVSKPAGGPNSLQNHLLGQNGS.S.VGRQQPQLT...SMNQRSSRANQ
  263-  308 (49.86/22.80)	....EMGMQKY..QMLGAQQTDISKMQP.SqLGGWNNQKDTRKTNLLQSSVKA.
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      90.65|      22|      53|     506|     527|       2
---------------------------------------------------------------------------
  506-  527 (38.53/16.26)	PREQSNGNHFSSSML..ESLTPSP
  541-  564 (29.30/10.97)	PLIPMDVDSISAFLLhgNSAAPAP
  566-  583 (22.82/ 7.25)	....ANGSNQVTPTK..PTLPASP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     126.94|      39|      59|     591|     631|       3
---------------------------------------------------------------------------
  591-  631 (59.55/41.88)	GQAEVQAGAGDRTSVTEKPIDRLMAAIRSSSPaaLRSSANS
  653-  691 (67.39/41.91)	GTSSQQQRGGSNTARKMKRVFNDTAAHSESLP..LGSMDGS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.57|      20|      28|     384|     411|       4
---------------------------------------------------------------------------
  384-  403 (33.38/34.52)	FLSLPAAKANEYKRKAYAKR
  424-  443 (34.18/16.50)	KLDFPKYKEDVQKLVAYIER
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22502 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGAGDRTSVTEKPIDRLMAAIRSSS
2) HGQIGTVLDGTSSQQQRGGSNTARKMKRVFNDTAAHS
3) LERRMQSRSQLRLANAAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQQMVYPRNKNLQTEVEQKHPGVMKILDQRPKFQPKEITTVGPGVSLWQMQSGASQSQSQHASRQAQTTNYVGCSPPSVSKPAGGPNSLQNHLLGQNGSSVGRQQPQLTSMNQRSSRANQQEMGMQKYQMLGAQQTD
4) MNTGYQLPNCREQPQVINLPGNASSTSGGKSRQQKQPADTSILQSRQTYMARTPPPREQSNGNHFSSSMLESLTPSPVANPVIAPASRCD
5) SKMQPSQLGGWNNQKDTRKTNLLQSSVKASEREPMTPPLQQIAG
553
644
89
451
280
621
680
278
540
323










Molecular Recognition Features






MoRF SequenceStartStop




1) KLARYYQPRYA
33
43