<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22498

Description Uncharacterized protein
SequenceMASTGGGTGGGRHWLEDEAPDLRSRIRQTLTSKLARYYQPRYAPDSQEAQRFVANFEEVAFRGTNSKEDYMRNISSKLLIMEKKTSGLLERRMQSRSQLRLANAAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQQMVYPRNKNLQTEVEQKHPGVMKILDQRPKFQPKEITTVGPGVSLWQMQSGASQSQSQHASRQAQTTNYVGCSPPSVSKPAGGPNSLQNHLLGQNGSSVGRQQPQLTSMNQRSSRANQQEMGMQKYQMLGAQQTDISKMQPSQLGGWNNQKDTRKTNLLQSSVKASEREPMTPPLQQIAGAQQSTLLCQSSQNTAMMGSAREYDLIEGMFSQIKSWKDAYFSQFVELERRVVIPTLTEEQFLSLPAAKANEYKRKAYAKRSIRKILNFLLLEKSDVNEGLKLDFPKYKEDVQKLVAYIERGKAHNAEMNTGYQLPNCREQPQVINLPGNASSTSGGKSRQQKQPADTSILQSRQTYMARTPPPREQSNGNHFSSSMLESLTPSPVANPVIAPASRCDPLIPMDVDSISAFLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGAGDRTSVTEKPIDRLMAAIRSSSPAALRSSANSIWSVLSMSDTIPHGQIGTVLDGTSSQQQRGGSNTARKMKRVFNDTAAHSESLPLGSMDGSCMTFECDASDSGSSSEQNIKRPKTQNVNDALLKEIKSINDTLIDTVVSISMDGIAPYDGGTTIKLSYSAVSLSPTVKSLFATSEMVLYISEFRHFAAPYATSCSYPDVLTDFLLMQSLVLPVKLFVPADYPSSSPVPINDEGDEVPRRNSTTISASVDVAFRHALRGLLEPWSIEAVARAWDACVRKAVTQFAHRLGGGTVNSIFGGWERCTAA
Length905
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.541
Instability index58.07
Isoelectric point9.26
Molecular weight98632.09
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22498
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     149.52|      29|      30|     235|     263|       1
---------------------------------------------------------------------------
  183-  206 (25.62/ 7.24)	..GPGVSLWQMQSGASQ..SQSQHASRQ...
  208-  236 (43.58/16.58)	QTTNYVGCSPPSVSKPA..GGPNSLQNHLLG
  237-  265 (47.49/18.62)	QNGSSVGRQQPQLTSMN..QRSSRANQQEMG
  267-  295 (32.83/10.99)	QKYQMLGAQQTDISKMQpsQLGGWNNQKD..
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.72|      26|      31|     402|     432|       2
---------------------------------------------------------------------------
  405-  432 (37.36/31.94)	IRKILNFLLLEK...SDVNEGLKLdfPKYKE
  434-  462 (40.36/19.73)	VQKLVAYIERGKahnAEMNTGYQL..PNCRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      94.76|      29|      34|     516|     545|       3
---------------------------------------------------------------------------
  516-  544 (52.90/25.66)	SSSML..ESLTPSPVANPV..IAPASRCDPLIP
  551-  583 (41.86/15.46)	SAFLLhgNSAAPAPKANGSnqVTPTKPTLPASP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      97.01|      32|      39|     722|     758|       4
---------------------------------------------------------------------------
  722-  758 (44.29/47.43)	LLKEIKSINDTlIDTVVSIS..MDGIAPYdggtTIKLSY
  763-  796 (52.72/37.70)	LSPTVKSLFAT.SEMVLYISefRHFAAPY....ATSCSY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      77.79|      25|      35|     297|     321|       6
---------------------------------------------------------------------------
  297-  321 (41.94/26.14)	RKTNLLQSSVK.......ASEREPMTPPLQQI
  325-  356 (35.85/21.25)	QQSTLLCQSSQntammgsAREYDLIEGMFSQI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     109.71|      34|      49|      54|      88|       7
---------------------------------------------------------------------------
   54-   88 (53.38/38.82)	ANFEEvAFRGTN....SKEDYMRNISSKLLIMEKKTSGL
  102-  139 (56.33/36.47)	ANAAQ.ALQGGNpsvrPEAGMMATPGPTSQPMTPQTSGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      72.99|      24|      38|     647|     671|       8
---------------------------------------------------------------------------
  647-  671 (36.97/25.08)	IGTvLDGT....SSQQQRGGSNTARKMKR
  685-  712 (36.03/19.88)	LGS.MDGScmtfECDASDSGSSSEQNIKR
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22498 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) FLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGAGDRTSVTEKPIDRLMAAIRSSS
2) HGQIGTVLDGTSSQQQRGGSNTARKMKRVFNDTAAHS
3) LERRMQSRSQLRLANAAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQQMVYPRNKNLQTEVEQKHPGVMKILDQRPKFQPKEITTVGPGVSLWQMQSGASQSQSQHASRQAQTTNYVGCSPPSVSKPAGGPNSLQNHLLGQNGSSVGRQQPQLTSMNQRSSRANQQEMGMQKYQMLGAQQTD
4) MNTGYQLPNCREQPQVINLPGNASSTSGGKSRQQKQPADTSILQSRQTYMARTPPPREQSNGNHFSSSMLESLTPSPVANPVIAPASRCD
5) SKMQPSQLGGWNNQKDTRKTNLLQSSVKASEREPMTPPLQQIAG
553
644
89
451
280
621
680
278
540
323










Molecular Recognition Features






MoRF SequenceStartStop




1) KLARYYQPRYA
33
43