<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22493

Description Uncharacterized protein
SequenceMNSVITIELIGHLLHNKVITRILSLARENMQTQWGLFTYRLRLLVANSSTLQASTMSLVAFQQLILDDHNVHGENKHSLHKKFHPMVASNPLSSPNGHCLGGSYSALWTPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIEGPVPHLETRLCMLLSIATLAVADIIEEADSRCGETDLSSHWKQKTATDDLRKELMLSLQALGDYESLLVPPPCIISAANQAASKAAMLVSGINSSSGYMESINETGNMRHLIVESCISRNLLDTSAYYWPGYINGHVNSMSHAIPSQLAGWAAFMKELEKLFEVAVNGSDDDKVSAATVLCGATLLRGWNFQEHTVRLVVKLLSHSDPADYSGRESQLIKHGPMLNVILTGISPVDYAPIFSFHGLVPELATVLMAICEVFGCLSPSVSWTLGAGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLSASSSSKSRSSQKQLPVTSSQSSQNPIFMDSFPKLKLWYRQHQACLASPLSGLAHGTPVHNIVDSLLNLMFRKANKGSTSIGSVSGSSSISNSSGPGDDGSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASTATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGVDVPRLATGGTTLGRLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVVQLLRSCFTSILGMSSTSLCCCGGVASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVSRHGSDKLKRTKYAMGHGKISLATAMTQVKVAASLGATLVWLSGGTTLVQSLFQEMLPSWFLSAQDLDRGGASGGTVYKLGGHALAYFAVYSGMFAWGIDPTPVSRRRERVMRSHLEFLASALDGKISLGCNMSLWRAYVSGFLGLVVDRAPCLLHEVDLKVLKKLSIGLRQWKEKELAVAILCRGGPEAMGVAAELILDSEW
Length1080
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.163
Instability index42.04
Isoelectric point6.93
Molecular weight117022.76
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22493
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     477.14|     160|     709|     183|     351|       3
---------------------------------------------------------------------------
  183-  351 (250.91/167.00)	LLSIATLAVADIIEEADSRCGETDLS......SHWKQKTATDDLRKELMLSLQA..........................LGDYESLLVPPPCIISAANQA....ASKAAMLVSGINSS..SGYMESInetgnMR.HL.IVESCISRNL.LDTSAYYWPGYINGHVNSMSHAIPSQLAgwAAFMKELEKLfEVAVNGSDDDKVSAAtVLC
  861- 1061 (226.23/128.69)	ILSLLMLSVKDIAETTVSRHGSDKLKrtkyamGHGKISLATAMTQVKVAASLGAtlvwlsggttlvqslfqemlpswflsAQDLDRGGASGGTVYKLGGHAlayfAVYSGMFAWGIDPTpvSRRRERV.....MRsHLeFLASALDGKIsLGCNMSLWRAYVSGFLGLVVDRAPCLLH..EVDLKVLKKL.SIGLRQWKEKELAVA.ILC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     138.18|      44|     215|     376|     459|       4
---------------------------------------------------------------------------
  376-  424 (65.35/86.36)	SDPADySGreSQLIKHGPMLNvILTGIsP..VDYAPIFSFHG.LVP.ELATVL
  595-  642 (72.84/25.62)	SGPGD.DG..SHLWPQLPAWE.ILEAV.PfvVDAALTACSHGrLFPrELATGL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      47.12|      13|      86|     354|     366|       5
---------------------------------------------------------------------------
  354-  366 (26.36/15.89)	TLLRGWNFQEHTV
  441-  453 (20.76/11.03)	TLGAGEEISAHTV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      89.03|      25|      76|     671|     695|       6
---------------------------------------------------------------------------
  671-  695 (46.98/24.19)	PAFMN...GTDWPSPAANLSMVEEHIKK
  746-  773 (42.05/20.97)	PALENlaaSCPWPSMAIVAALWTQKVKR
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22493 with Med33 domain of Kingdom Viridiplantae
Unable to open file!