<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22491

Description Uncharacterized protein
SequenceMAATGGGGGGGGRHWIEAETPDFRARMRRIYLPTKLATYFQPKYSPNSLEAQTLIARLEEDAFRGTNSKVEYVKKISDKVVTMLRNKTDELQRRAQLQSQLQQAIEAQALHGGSSSVMPEAVMVASRRPTSQSMAPQTSGLVPNQNMLHPCTSNMQIEVEKKHHGQDHYPNFQPMGITRAGPGVQSGAWPMQSGASQSESQYMARQPQATNFVGYSLASGSKPVIRPNSQHNHPLGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQMLGAQQADVSKMQPGQLRIRNNQEDARQTGFLHPPFKVSEPMTPPVQQIPGAQQSQIPAMMGSTREYDLEEIFCKIKSWKDAYFPQFLELDRRVVLPTLTEEQFSSLPEAKANLYIRKADFKKSIRRILNLMSLQKSDVHEGLKVDLPKYEKLIHHFLALLERNKTCHAKMNTGYQLQNCDEQRKAINLTGNASPITGGTSREQKQPADARILQPRQTTMARTTTPHQQSNDNYLQGIESASFSSPGSLQSSLQSWSSSMLESLRPSPLANPVVAPASPCAPVPIISMDVDSITAFLMDDNAAAAPPPKANGSNQVTRTEPIVPASPLQADIAAGHGEVQARGGDGTPVTKRPIDRLMDAIRSSSPGALHSSINSIRSFLSMSDIVPHGKIGTMLDCNSLQQQGGCNTVNKMKRVFNHTGSRSQSLPLGSMDGSCMSFECGASDSGSSSENASNEALLEEIKSINSTLIDTVLSISDYCGMDGIPRCDGGTTIKLSYSAVSLSPTFKSVFATSEACLVLPVKLFVPADYPRSSPVLRNDEGDEVPRKNSSAISALADVVFRHALDALPEPRSIEAMARAWDASVRKVVTRFARQQGGGTISSMFGGWKRCAAA
Length882
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.480
Instability index63.85
Isoelectric point8.97
Molecular weight96172.77
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22491
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     121.74|      33|      38|     230|     263|       1
---------------------------------------------------------------------------
  197-  228 (21.20/ 8.05)	.......QSESQYMARQPQATNFvgyslasgsKPVIRP.N...
  230-  262 (58.54/38.35)	QHNHPLGQNDSAIGVRQPQITRL.........NEILRA.NQQE
  266-  293 (41.99/20.77)	QRYQMLGAQQADVSKMQP...............GQLRIrNNQE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     105.59|      28|      37|     518|     553|       2
---------------------------------------------------------------------------
  507-  534 (43.89/15.54)	IESASFSSPGSLQS.SLQSWSSSM.LE...SLR
  543-  574 (35.28/24.61)	VAPASPCAPVPIISmDVDSITAFL.MDdnaAAA
  633-  655 (26.41/ 7.22)	......SSPGALHS.SINSIRSFLsMS...DIV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.40|      31|      37|      93|     128|       3
---------------------------------------------------------------------------
   51-   86 (44.10/27.95)	AQ...TLIARLEEDAFRGTNSKVeyvkkISDKVVTMLRN
   95-  128 (46.29/36.77)	AQlqsQLQQAIEAQALHGGSSSV.....MPEAVMVASRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.85|      16|      36|     732|     748|       4
---------------------------------------------------------------------------
  732-  748 (23.07/19.04)	SINSTLiDTVLSISDYC
  770-  785 (27.77/17.86)	SLSPTF.KSVFATSEAC
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      75.11|      21|     190|     294|     317|       5
---------------------------------------------------------------------------
  294-  317 (36.08/31.70)	DARqtgFLHPPFKVSEPMTPPVQQ
  478-  498 (39.03/24.91)	DAR...ILQPRQTTMARTTTPHQQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      38.64|      11|     190|     670|     681|       6
---------------------------------------------------------------------------
  670-  681 (17.25/14.91)	QQQGGcNTVNKM
  862-  872 (21.39/11.85)	RQQGG.GTISSM
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     114.01|      30|      31|     339|     368|       7
---------------------------------------------------------------------------
   15-   36 (27.17/13.75)	.........WIE......AETPDFRARMRRIY.LPTkL
  339-  368 (54.89/34.68)	EEIFCKIKSWKD......AYFPQFLELDRRVV.LPT.L
  370-  403 (31.96/17.37)	EEQFSSLPEAKAnlyirkADFKKSI...RRILnLMS.L
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22491 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AINLTGNASPITGGTSREQKQPADARILQPRQTTMARTTTPHQQSNDNYLQGIESA
2) LMDDNAAAAPPPKANGSNQVTRTEPIVPASPLQADIAAGHGEVQARGGDGTPVTKRPIDRLMDAIRS
3) MLRNKTDELQRRAQLQSQLQQAIEAQALHG
4) SKMQPGQLRIRNNQEDARQTGFLHPPFKVSEPMTPPVQQIPGAQQSQIPAMM
5) SVMPEAVMVASRRPTSQSMAPQTSGLVPNQNMLHPCTSNMQIEVEKKHHGQDHYPNFQPMGITRAGPGVQSGAWPMQSGASQSESQYMARQPQATNFVGYSLASGSKPVIRPNSQHNHPLGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQMLGAQQA
455
566
83
279
116
510
632
112
330
276










Molecular Recognition Features






MoRF SequenceStartStop




NANANA