<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22490

Description Uncharacterized protein
SequenceMGAAEAPALAAAPAAGGGVGGEPLERRVMAAVKASEARGDPPLLRAVEISRLVAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSSSLSLLAGSNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDSVLEDCGISSGMTQDQESVYPIEGPQPMDMDVKGVSAVKQNEQREQLRRRNTVMALEVLHIMAADTKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKMTKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACYHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAVGLRSWHEHDLALSLLERGGPKTISAVVETLLQ
Length1302
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.169
Instability index49.23
Isoelectric point7.88
Molecular weight140555.48
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22490
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.01|      37|      78|     903|     980|       1
---------------------------------------------------------------------------
   16-   53 (57.00/14.68)	GGGVGG.EPLERRVMAA....VKASEARGDPPLLrAVEISRLV
  910-  951 (56.02/66.61)	GAALHSiEDEVKEILASagvqIHSCYPRGVPPML.PLPMAALV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.11|      28|      78|     975|    1004|       2
---------------------------------------------------------------------------
  975- 1004 (53.47/33.44)	ENCAG..GSSWPSMPiiGALWTQKVRRWHD..FI
 1054- 1085 (45.64/23.06)	ESITGhqGLHFPMAP..GFIYLRTCRTFHDtyFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      86.10|      25|     337|     669|     695|       3
---------------------------------------------------------------------------
  669-  695 (44.54/30.12)	SLYGMVPDVAAALMPLCeaFGSM..PPPS
 1011- 1037 (41.56/22.33)	SPFGRDKDAVAQLIQSC..FSSFlrSSPS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     200.13|      53|     230|      71|     125|       4
---------------------------------------------------------------------------
   71-  125 (84.99/70.39)	VSNLCFAHNSPSLWKLLDQAMSSRLLCpLHVLALLTArVLPQRRAQPEAYRLYLE
  258-  286 (34.56/19.14)	.......................RLIC.LNMPDKFS..VLSQRLTLIEAHKMALE
  305-  351 (80.57/56.15)	VSNLDYQPNNKRLVGVLGNLRSSN.....SMLGQLTG...AGRAACWIIFDIYME
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     136.08|      43|     230|     369|     411|       5
---------------------------------------------------------------------------
  369-  411 (74.70/48.03)	KEMSKTAQAINEAS....W..QETFKALWISALRLVQRAREPLEGPIPH
  596-  644 (61.38/38.04)	QEKSAAAKIVCGASlvrgWniQEHVVRMVVKLLSPPLPSDSSLQGSMSH
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     318.02|     107|     310|     475|     595|       6
---------------------------------------------------------------------------
  475-  595 (161.44/137.75)	VANAAASkaAIFRANCK..VVGGNPSmigqSDSSTKAVGNMLHlIVEACISRNLIDTTAYL..WPgYV...VLPG..HSKDTSLPQESPWVNfmqgapLSDPLKNALIATPASSVAELDK.LYH.IALNGSE
  788-  905 (156.58/98.29)	VANKILS..MICRKMTKsgVVSGNLS....SASSSSVSGSSLS.TSDDSYQRPTLPAWEFLeaVP.YVleaVLTAcyHGRISSRDMTTSLRD......LVDFLPASLAAIVSYFSAEITRgIWKaVPMNGTE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     187.56|      60|    1068|     126|     190|       7
---------------------------------------------------------------------------
  126-  190 (86.98/72.30)	LLKGNVTSSS...LSLLA......GSNRDKITKSIDAALQLsksyGVSGTDFGHVVILFVLIVItKLIDSVLED
 1191- 1259 (100.58/68.09)	LLWGSEKTSPimkLSFLSrrprvvGTHMDFIAGVLDGHILL....GCDPGTWKAYVSCFVFLVV.KFVPTWLRD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22490 with Med33 domain of Kingdom Viridiplantae
Unable to open file!