<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22483

Description Uncharacterized protein
SequenceMASTGGDGGRHWLDDEAPDLRSRIRQTLTSKLARYYQPRYAPDSQEAQRFVANFEEVAFRGTNSKEDYMRNISSKLLIMEKKTSGLLERRMQSRSQSRLANTAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQHMVYPRNTNLQTEVEQKHPGVMTILDQRPKFQPKGITTVGPGVSLWQMQSGANQSQSQHASRQAQTTNFVGCSPPSVSKTAGGPNSLQNHLLGQNGSSVGKQQPQLTRMNQQSSRADQQETDMQKYQMLGAQQTNISKMQPSQLGGCNNQKDTRQTNLLRSPVEASEYEPMAPPLQQIAGAQQSTLLCQSSQNTAMMGSAREYDLIEGMFSQIKSWKDAYFSQFVELERRVVIPTLTEEQFLSLPAAKANEYKRKAYAKRSIRKILNFLLLEKSDVNEGLKLDFPKYKEDVQKLVAYIERGKAHNAEMNTGHQLRNCREQPQVINLTGNASSISGGKSRQQKQPADTSILQSRQTNMARTPPPHEQSNGNHLLGIASPFSSPGSLPSCSSSLLESLTPSPVANPVIAPASRCDPLIPMDVDSISAFLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGGGDRTPVTEKPIDRLMAAIRSSSPAALRSSANSIWSVLSISDTVPHGQIGTILDDTSSQQQWGGPNTARRMKRVFNHTAAHSESLPLGSMDGSCMTFECDASDSGSSSEQNIKRAKTQNANDALLKEIKSINDTLIDTVVSISMDGIAPYDGGTTIKLSYSAVSLSPTVKSLIATSGMSLVLPVKLFVPADYPSSSPVPISDGGDEVPRRNSSAISASVDVAFRHALRGLLEPWSIEAVARAWDACVRKAVTQFAHRLGGGTVNSIFGGWERCAAA
Length888
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.531
Instability index59.41
Isoelectric point9.16
Molecular weight96035.92
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22483
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     779.02|     185|     188|     465|     652|       1
---------------------------------------------------------------------------
  184-  289 (113.80/58.03)	VSLWQMQS.....GANQSQSQHASR...QAQTTNfVGCSPPSVSKTAGgpnslqNHLLG..............................................................QNGS...SVgkqQPQLTRMN..........Q....QSSRA....D..QQETDMQKYQMLG.AQQTN..ISKMQPS.QLGGCN......................................
  291-  444 (145.83/76.90)	..................QK...DT.....RQTN.LLRSPV..EASEY......EPM...APPL....QQiAGAQQStllCQSSQNTAMMGSAREYDLIEGmfsqiKSWK......DAYFSQFVElerRV...VIPTLTEE..........QFLslPAAKA....NEYKR....KAYAKRS.IRKILnfLLLEKSDVNEGLKLDFPKYKEDVQKLVAYIeRGKA.................
  465-  649 (310.24/177.24)	INLTGNASSI.SGGKSRQQKQPADTSILQSRQTN.MARTPPPHEQSNG......NHLLGIASPF....SS.PGSLPS...CSSSLLESLTPSPVANPVIAP.....ASRC......DPLIPMDVD...SI...SAFLLHGN..........SAA..PAPKA....NGSNQVTPTKPTLPAS.PRQAD..IAAGQAEVQAGGGDRTPVTEKPIDRLMAAI.RSSSPAALRSSANSI...WSV
  656-  848 (209.15/111.82)	VP.HGQIGTIlDDTSSQQQWGGPNTARRMKRVFN...HTAAHSESLPL......GSMDGSCMTFecdaSD.SGS.......SSEQNIKRAKTQNANDALLK.....EIKSindtliDTVVSISMD...GI...APY..DGGttiklsysavSLS..PTVKSliatSGMSLVLPVKLFVPADyPSSSP..VPI......SDGGD.....EVP.RRNSSAI.SASVDVAFRHALRGLlepWSI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     138.07|      46|      48|      52|      98|       2
---------------------------------------------------------------------------
   32-   86 (64.89/43.82)	LARYYQPRyapdsqeAQRFvANFEEvAFRGTN....SKEDYMRNISSKLLIMEKKTSGL
   87-  137 (73.18/45.57)	LERRMQSR.......SQSRlANTAQ.ALQGGNpsvrPEAGMMATPGPTSQPMTPQTSGL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22483 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGGGDRTPVTEKPIDRLMAAIRSSS
2) NLTGNASSISGGKSRQQKQPADTSILQSRQTNMARTPPPHEQSNGNHLLGIASPFS
3) QIGTILDDTSSQQQWGGPNTARRMKRVFNHTAAHS
4) SKMQPSQLGGCNNQKDTRQTNLLRSPVEASEYEPMAPPLQ
5) TSGLLERRMQSRSQSRLANTAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQHMVYPRNTNLQTEVEQKHPGVMTILDQRPKFQPKGITTVGPGVSLWQMQSGANQSQSQHASRQAQTTNFVGCSPPSVSKTAGGPNSLQNHLLGQNGSSVGKQQPQLTRMNQQSSRADQQETDMQKYQMLGAQQTN
568
466
660
278
83
635
521
694
317
276










Molecular Recognition Features






MoRF SequenceStartStop




1) ARYYQPRYA
33
41