<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22482

Description Uncharacterized protein
SequenceMASTGGDGGRHWLDDEAPDLRSRIRQTLTSKLARYYQPRYAPDSQEAQRFVANFEEVAFRGTNSKEDYMRNISSKLLIMEKKTSGLLERRMQSRSQSRLANTAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQHMVYPRNTNLQTEVEQKHPGVMTILDQRPKFQPKGITTVGPGVSLWQMQSGANQSQSQHASRQAQTTNFVGCSPPSVSKTAGGPNSLQNHLLGQNGSSVGKQQPQLTRMNQQSSRADQQETDMQKYQMLGAQQTNISKMQPSQLGGCNNQKDTRQTNLLRSPVEASEYEPMAPPLQQIAGAQQSTLLCQSSQNTAMMGSAREYDLIEGMFSQIKSWKDAYFSQFVELERRVVIPTLTEEQFLSLPAAKANEYKRKAYAKRSIRKILNFLLLEKSDVNEGLKLDFPKYKEDVQKLVAYIERGKAHNAEMNTGHQLRNCREQPQVINLTGNASSISGGKRQQKQPADTSILQSRQTNMARTPPPHEQSNGNHLLGIASPFSSPGSLPSCSSSLLESLTPSPVANPVIAPASRCDPLIPMDVDSISAFLLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGGGDRTPVTEKPIDRLMAAIRSSSPAALRSSANSIWSVLSISDTVPHGQIGTILDDTSSQQQWGGPNTARRMKRVFNHTAAHSESLPLGSMDGSCMTFECDASDSGSSSEQNIKRAKTQNANDALLKEIKSINDTLIDTVVSISMDGIAPYDGGTTIKLSYSAVSLSPTVKSLIATSGMSLVLPVKLFVPADYPSSSPVPISDGGDEVPRRNSSAISASVDVAFRHALRGLLEPWSIEAVARAWDACVRKAVTQFAHRLGGGTVNSIFGGWERCAAA
Length887
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.530
Instability index59.62
Isoelectric point9.16
Molecular weight95948.84
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22482
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     228.86|      49|     188|     273|     321|       1
---------------------------------------------------------------------------
  240-  271 (40.17/18.07)	....VGKQQP.QLTRMNQQSsraDQ.....QETDMQK.........Y...........QMLG
  273-  321 (91.19/50.23)	QQTNISKMQPSQLGGCNNQK...DT.....RQTNLLRSPV..EASEYEPM...APPLQQIAG
  323-  354 (48.58/23.37)	QQ........STL.LC...Q...SS.....QNTAMMGS.....AREYDLI...EGMFSQI..
  463-  520 (48.91/23.58)	QVINLTGNASSISGGKRQQKqpaDTsilqsRQTNMARTPPphEQSNGNHLlgiASPFS....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     172.88|      40|      56|     123|     162|       2
---------------------------------------------------------------------------
   79-  113 (41.79/19.65)	.......MEKKTSGLLERrmQSRSQSRL...ANTAQALQGGNPSV
  123-  162 (72.92/39.78)	PGPTSQPMTPQTSGLVPN..QHMVYPRN...TNLQTEVEQKHPGV
  182-  218 (58.16/30.24)	PGVSLWQM...QSGANQS..QSQHASRQaqtTNF...VGCSPPSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.80|      31|      40|     534|     565|       3
---------------------------------------------------------------------------
  534-  565 (51.17/31.05)	ESLTPSPVANPV..IAPASRCDPLIPMDVDsISA
  571-  603 (48.62/25.06)	NSAAPAPKANGSnqVTPTKPTLPASPRQAD.IAA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.82|      19|      39|     383|     401|       4
---------------------------------------------------------------------------
  383-  401 (31.41/23.62)	LSLPAAKANEYKRKAYAKR
  423-  441 (31.41/23.62)	LDFPKYKEDVQKLVAYIER
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      88.01|      29|      40|     652|     684|       5
---------------------------------------------------------------------------
  652-  684 (46.63/35.67)	SDTVPHGQI.GTILD...DTSSqqqwGGPNTARRMKR
  693-  725 (41.38/21.53)	SESLPLGSMdGSCMTfecDASD....SGSSSEQNIKR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     113.22|      36|      40|     735|     770|       6
---------------------------------------------------------------------------
  735-  770 (57.78/36.19)	LLKEIKS.INDTLIDTVVSISMDGIAPYDGGTTIKLS
  776-  812 (55.44/34.42)	LSPTVKSlIATSGMSLVLPVKLFVPADYPSSSPVPIS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22482 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) LLHGNSAAPAPKANGSNQVTPTKPTLPASPRQADIAAGQAEVQAGGGDRTPVTEKPIDRLMAAIRSSS
2) NLTGNASSISGGKRQQKQPADTSILQSRQTNMARTPPPHEQSNGNHLLGIASPFS
3) QIGTILDDTSSQQQWGGPNTARRMKRVFNHTAAHS
4) SKMQPSQLGGCNNQKDTRQTNLLRSPVEASEYEPMAPPLQ
5) TSGLLERRMQSRSQSRLANTAQALQGGNPSVRPEAGMMATPGPTSQPMTPQTSGLVPNQHMVYPRNTNLQTEVEQKHPGVMTILDQRPKFQPKGITTVGPGVSLWQMQSGANQSQSQHASRQAQTTNFVGCSPPSVSKTAGGPNSLQNHLLGQNGSSVGKQQPQLTRMNQQSSRADQQETDMQKYQMLGAQQTN
567
466
659
278
83
634
520
693
317
276










Molecular Recognition Features






MoRF SequenceStartStop




1) ARYYQPRYA
33
41