<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22471

Description Uncharacterized protein
SequenceMLSPLFCRIRQLIDDNLNLSKIFGFSACEPGVFIVEFVLCILWQLVDTALDDESLLELTPEKKAQWPTRPQDISAFEVSFSEQKPEKIEKLQRMNSVITIELIGHLLHDKVITRILSLARENMQTQWGLFTYRLQLLVANSSTLQASTMSLEAFQQLILDDHNVHGENKHSLHKKFHPMVASNPLSSPNGHCLGGSYSALWTPIDMYLEDCLDGSIAATNSIEILSGLVKALQAVNRSSWHDAFMALWIASVRLVQREREPIEGPVPHLETRLCMLLSIATLAIADIIEEADSRRGETDLSSHWKQKTATDDLRKELMLSLQALGDYESLLVPPPCIISAANQAASKAAMLVSGINSGSGYMESINETGNMRHLIVESCISRNLLDTSVYYWPGYINGHVNSMSHAIPSQLAGWAAFMKGTPLTQSLVSVLVSSPASSLAELEKLFEVAVNGSDDDKVSAATVLCGATLLRGWNFQEHTVRLVVKLLSHSDPADYSGRESQLIKHGPMLNVILTGISPVDYAPIFSFHGLVPELATVLMAICEVFGCLSPSVSWTLGAGEEISAHTVFSNAFILLLRLWKFNHPPLEYCIMGDGAPVGSQLTPEYLLLLRNSQVLSASSSSKSRSSQKQLPVTSSRSSQNPIFMDSFPKLKLWYRQHQACLASPLSGLAHGTPVHNIVDSLLNLMFRKANKGSTSIGSVSGSSSISNSSGPGGDGSHLWPQLPAWEILEAVPFVVDAALTACSHGRLFPRELATGLKDLADFLPASTATIVSYFSAEVTRGVWKPAFMNGTDWPSPAANLSMVEEHIKKIVAATGVDVPRLATGGTTLGRLPLPLAAFVSLTITYKLDKASERFLNLAGPALENLAASCPWPSMAIVAALWTQKVKRWSDFLVFSASRTVFHHNNDAVVQLLRSCFTSILGMSSTSLCCCGGVASLLGHGFGSHCSGGLSPVAPGILYLRIFRCIKDCSILAEDILSLLMLSVKDIAETTVSRHGSDKLKRTKYAMGHGQISLATAMTQVKVAASLGATLVWLSGGTTLVQSLFQEMLPSWFLSVQDLDRGASGGTVYKLGGHALAYFAMYSGMFAWGIDPTPVSRRRERVMRSHLEFLASALDGKISLGCNMSLWRAYVSGFLELVVDRAPCLLHEVDLKVLKKLSIGLRQWKEKELAMAMLCRGGPEAMGIAAELILDSEW
Length1193
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.147
Instability index42.68
Isoelectric point6.41
Molecular weight129935.60
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22471
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     328.86|     116|     226|     402|     538|       1
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  402-  470 (89.02/39.21)	.............................................................................................................................................SMSHAIP...SQ.LAGWA.........................AFMKGTP...LTQSLVSVLVSSPASSLAE.......LEKLFE..VAVNGSDDDKVSAATVLCGATLL
  488-  536 (47.09/47.33)	SHSDPADYSGRESQLIKHGPMLNvILTGIsP..VDYAPIFSFHG.LVP.ELAT......................................................................................................................................................................................................
  625-  703 (61.81/23.49)	.....................................................vlmaicevfgclspsvswtlgageeisahtvfsnafilllrlwkfnhppleycimgdgapvgsqltpeyllllrnsqvlsassssksrSSQKQLPvtsSR.SSQNP.........................IFMDSFPklkLWYRQHQACLASPLSGLAHgtpvhniVDSLLN..LMFRKANKGSTSIGSVSGSS...
  704-  829 (130.93/62.02)	SISNSSGPGGDGSHLWPQLPAWE.ILEAV.PfvVDAALTACSHGrLFPrELAT....................................................................................................gLKDLAdflpastativsyfsaevtrgvwkpAFMNGTD...WP.........SPAANLSM.......VEEHIKkiVAATGVDVPRLATG....GTTLG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      67.52|      18|     922|      24|      41|       2
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   24-   41 (34.06/18.80)	GFSACEPGVFIVEFVLCI
  948-  965 (33.46/18.35)	GLSPVAPGILYLRIFRCI
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     342.42|     112|     804|     215|     338|       3
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  215-  338 (174.13/121.81)	SIAATnsIEILSG...LVKALqavnrsswHDAFMALWIASVRlvQREREPIEGPVPHLETRLCMLLSIATLAIADIIEEAD.SRRGETDLSSHWKQKTATDDLRKEL..MLSL.QA.LGDYESLLVP.PPCII
 1025- 1145 (168.29/94.66)	SLGAT..LVWLSGgttLVQSL........FQEMLPSWFLSVQ..DLDRGASGGTVYKLGGHALAYFAMYSGMFAWGIDPTPvSRRRERVMRSHLEFLASALDGKISLgcNMSLwRAyVSGFLELVVDrAPCLL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.58|      13|      16|     918|     931|       4
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  918-  931 (22.86/17.82)	SILGMSSTSlCCCG
  935-  947 (26.72/15.93)	SLLGHGFGS.HCSG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.68|      15|     487|     136|     150|       5
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  136-  150 (25.17/12.81)	LLVANSSTLQASTMS
  607-  621 (24.51/12.31)	LLLRNSQVLSASSSS
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      48.29|      12|      16|     184|     195|       9
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  184-  195 (24.39/14.70)	PLSSPNGHCLGG
  203-  214 (23.90/14.24)	PIDMYLEDCLDG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      37.70|      12|      24|      54|      65|      10
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   54-   65 (20.63/16.85)	SLLELTPEK..KAQ
   79-   92 (17.07/12.38)	SFSEQKPEKieKLQ
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22471 with Med33 domain of Kingdom Viridiplantae
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