<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22470

Description Uncharacterized protein
SequenceMGAAEAPALAAAPAAGGGGELLERRVMAAVKASEARGDPPLLRAVEISRLAAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSFSLSLLAGPNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDCVLEDCGISSGMTQEQESVYPTEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMSLEVLHIMAADRKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSTTSTNSGSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHVKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASRLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWHENDLALSLLERGGPKAISAVVETLLQ
Length1331
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.151
Instability index48.96
Isoelectric point8.01
Molecular weight143860.17
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22470
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.55|      27|      78|     932|    1009|       1
---------------------------------------------------------------------------
   16-   42 (45.84/ 7.49)	GGGGELLE...RRVMAA....VKASEARGDPPLL
  939-  972 (38.71/74.46)	GAALHSIEdevKEILASagvqIHSCYPRGVPPML
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      99.11|      28|      78|    1004|    1033|       2
---------------------------------------------------------------------------
 1004- 1033 (53.47/37.04)	ENCAG..GSSWPSMPiiGALWTQKVRRWHD..FI
 1083- 1114 (45.64/25.52)	ESITGhqGLHFPMAP..GFIYLRTCRTFHDtyFV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     374.73|     129|     163|     107|     269|       3
---------------------------------------------------------------------------
  114-  260 (182.36/172.54)	QPEAYRLYLE.LLKgnvTSFSL...........SLLAGPNRDKITkSIDAALQLSKSY.G.VSGTDFGHVVILFvLIVITKLIDCvLEDCGISS.....GMTQEQESVypTEGPQPMDMDVKGVSAVKQNEQ.REQLRRkntvmslEVLHImaaDRKIQAFLRLICL
  275-  423 (192.37/106.61)	LIEAHKMALErLLP...TSHKIddlvmyiwrvsNLDYQPNNKRLV.GVLGNLRSSNSMlGqLTGAGRAACWIIF.DIYMENAMDG.RHLGGISAieiikEMSKTAQAI..NEASWQETFKALWISALRLVQRaREPLEG.......PIPHL...DTRLCMLLALIPL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     168.37|      41|     165|     430|     470|       4
---------------------------------------------------------------------------
  430-  470 (74.43/54.65)	KEETDA....CGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPP....SSL
  594-  636 (51.18/34.73)	QEKSAAakivCGA....SLVRGWNIQEHVVRMV..VKLLSPPlpsdSSL
  883-  909 (42.76/27.52)	.....A....C.SHGRIS..SR.DMTTSLRDLVDF..L...P....ASL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      58.14|      18|     164|    1119|    1136|       5
---------------------------------------------------------------------------
 1119- 1136 (34.74/22.56)	LRQV.IDCSHKLANG...WSSN
 1286- 1307 (23.40/12.78)	LRDIkLDTLKKIAAGlrsWHEN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     190.95|      60|      71|     723|     793|       7
---------------------------------------------------------------------------
  701-  766 (87.79/58.88)	DETSVYSVFSCAFlCLLRLWkfYKPPQEyCLA....GRGGSVRLELTLDYLVLMHNSRIefPNSSTTSTN
  775-  838 (103.16/73.83)	DEVPTQPIYIDSF.PKLRAW..YIQNQA.CIAstlsGLGNTNPVHQVANKILSMICRKI..TKSGVVSGN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22470 with Med33 domain of Kingdom Viridiplantae
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