<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22468

Description Uncharacterized protein
SequenceMGAAEAPALAAAPAAGGGGELLERRVMAAVKASEARGDPPLLRAVEISRLAAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSFSLSLLAGPNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDCVLEDCGISSGMTQEQESVYPTEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMSLEVLHIMAADRKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHVKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASRLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWHENDLALSLLERGGPKAISAVVETLLQ
Length1244
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.152
Instability index47.54
Isoelectric point8.12
Molecular weight134295.30
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22468
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     281.19|      88|     228|     691|     794|       1
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  702-  794 (136.22/117.10)	KLRAWY.IQNQACIASTLSglGNTNPVHQVANKILSMICRKITKSGvvSGNLSSASSSSVSGSSLsTSDDSYQRPTLPAWEFLEA......VPYVLEAVL
  938- 1032 (144.97/85.85)	KVRRWHdFIVLSCIRSPFG..RDKDAVAQLIQSCFSSFLRSSPSSG..SDITASRGVGALMGESI.TGHQGLHFPMAPGFIYLRTcrtfhdTYFVSEMIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     200.13|      53|     228|      69|     123|       2
---------------------------------------------------------------------------
   69-  123 (84.99/52.12)	VSNLCFAHNSPSLWKLLDQAMSSRLLCpLHVLALLTArVLPQRRAQPEAYRLYLE
  256-  284 (34.56/14.05)	.......................RLIC.LNMPDKFS..VLSQRLTLIEAHKMALE
  303-  349 (80.57/41.54)	VSNLDYQPNNKRLVGVLGNLRSSN.....SMLGQLTG...AGRAACWIIFDIYME
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     237.67|      76|     229|     367|     452|       3
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  367-  452 (111.46/93.03)	KEMSKTAQAINEAS....WQETFKALwISALRLVQRAREPLEGPIPHLDTRL..........CMLLALipLAIAAILKEETDACgaegnksLPRRLGLVS
  594-  683 (126.21/78.02)	QEKSAAAKIVCGASlvrgWNIQVPDV.AAALMPLCEAFGSMPPPSNHRSTIVdetsvysvfsCAFLCL..LRLWKFYKPPQEYC.......LAGRGGSVS
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     141.12|      41|    1011|     124|     188|       5
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  124-  167 (63.13/34.65)	LLKG.N.VTS..FSLSLL..AGPNRDKITKS....IDAALQlskSYGVSGTDFG
 1133- 1178 (51.78/19.79)	LLWG.SeKTSpiMKLSFL..S..RRPRVVGThmdfIAGVLD...GHILLGCDPG
 1213- 1244 (26.21/29.96)	GLRSwH.END..LALSLLerGGPK..AISAV....VETLLQ.............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     112.42|      37|     355|     453|     496|       6
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  453-  496 (50.64/60.67)	SLQDLVQYpgLlvpPSSLVNVANAAAskAAIFRANCKVVGGN....PS
  810-  850 (61.77/45.31)	SLRDLVDF..L...PASLAAIVSYFS..AEITRGIWKAVPMNgtewPS
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22468 with Med33 domain of Kingdom Viridiplantae
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