<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22467

Description Uncharacterized protein
SequenceMGAAEAPALAAAPAAGGGGELLERRVMAAVKASEARGDPPLLRAVEISRLAAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSFSLSLLAGPNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDCVLEDCGISSGMTQEQESVYPTEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMSLEVLHIMAADRKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHVKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASRLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWHENDLALSLLERGGPKAISAVVETLLQ
Length1300
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.163
Instability index48.45
Isoelectric point8.12
Molecular weight140394.37
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22467
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     615.41|     161|     166|     938|    1102|       1
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  732-  856 (142.08/74.26)	.................AGRG.......GSVSTGSFD...EVPT......Q..P....IYIDSFPKLR......AWYIQNQACIAST.LsglgntNPVHQVAN........................kILSM.ICRKITKS.....GVVSGNLSSASsssvSGSSLSTsddsyqRPTLPA........W.EF..LEA....V..P...Y......VLEAVLTACSHG
  873- 1028 (204.18/122.50)	FL.......PASLAAIVS........YFSAEIT..RGIwkAVPMngtewpS..PG.........AALHsiedevKEILASAGV..QI.H......SCYPR...G...V....PPML.....PLPMAA.LVSLtITFKLDRSLDYIHGIIGQALENCA....GGSSWPS......MPIIGALWTQKVrrWhDFIVLSC....IRSP...FGRDKD.AVAQLIQSCFSS
 1029- 1188 (222.59/120.70)	FL....RSSPSSGSDITASRG..VGALMGESITGHQGL..HFPM......A..PGF..IYLRTCRTFH......DTYFVSEMILRQV.I......DCSHKLANG...WssngPPHVksgrpPLSGAA.............SMASQVAMLGAGLLCVA....GG...PL......L..VQVLYEETL....PTLLLSAqeqmLEDPgpvASRLQGyAMANMLFFC.GS
 1189- 1273 (46.56/18.23)	LLwgseKTSPIMKLSFLSRRPrvVGTHM.DFIAGVLDG..HILL......GcdPGTwkAYV.SCFVFL......VVKFVPTW.LRDIkL......DTLKKIAAGlrsW.......................................................................................................................
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.86|      29|     161|     389|     470|       2
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  436-  470 (42.61/91.22)	CGAegnkSLPRRLGLVSSLQDLVqyPGLLVPP....SSL
  604-  636 (49.25/ 9.78)	CGA....SLVRGWNIQEHVVRMV..VKLLSPPlpsdSSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     186.81|      63|     168|      92|     258|       3
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  107-  173 (97.90/191.62)	VLPQRRAQPEAYRLYLE.LLKgnvTSFSL...........SLLAGPNRDKITkSIDAALQLSKSY.G.VSGTDFGHVVILF
  268-  344 (88.91/19.63)	VLSQRLTLIEAHKMALErLLP...TSHKIddlvmyiwrvsNLDYQPNNKRLV.GVLGNLRSSNSMlGqLTGAGRAACWIIF
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22467 with Med33 domain of Kingdom Viridiplantae
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