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Description
Uncharacterized protein Sequence MGAAEAPALAAAPAAGGGGELLERRVMAAVKASEARGDPPLLRAVEISRLAAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSFSLSLLAGPNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDCVLEDCGISSGMTQEQESVYPTEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMSLEVLHIMAADRKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHVKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASRLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWHENDLALSLLERGGPKAISAVVETLLQ Length 1301 Position Tail Organism Triticum aestivum (Wheat) Kingdom Viridiplantae Lineage Eukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta>
Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade>
Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity 0.07 Grand average of hydropathy 0.163 Instability index 48.57 Isoelectric point 8.12 Molecular weight 140481.44 Publications
Function
Interaction
Repeat regions
Repeats
>MDP22466
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 467.76| 137| 161| 777| 937| 1
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777- 909 (166.67/133.69) ................................GLGntnPV.HQVANKILSM.ICRKITKS.....G..VVSGNLSSASSSSVSGSSLSTSDDSyqrPTLPA.WEFLEAVPYVL....EAVLTAC...SHGRISSRDMTTSLRD..LVDFL...PASLAAIV......SYFSAEIT..RGIwkAVPMngtewpSPG
910- 1068 (156.84/113.13) AALHsiedevKEILASAGV..QIHSCyprgvpPML...PL.PMAA..LVSLtITFKLDRSldyihG..IIGQALENCAGGS.SWPSM.........PIIGAlW..TQKVRRWH....DFIVLSCirsPFGR..DKDAVAQLIQscFSSFLrssPSSGSDITasrgvgALMGESITghQGL..HFPM......APG
1076- 1190 (144.25/84.63) RTFH......DTYFVSEMIlrQVIDC..............sHKLANGWSSN.GPPHV.KS.....GrpPLSGAASMASQVAMLGAGLLCVAGG...PLLVQ.VLYEETLPTLLlsaqEQMLE.....DPGPVASRLQGYAMAN..ML.FF...CGSL......................................
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 91.86| 29| 161| 389| 470| 2
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436- 470 (42.61/88.34) CGAegnkSLPRRLGLVSSLQDLVqyPGLLVPP....SSL
604- 636 (49.25/ 9.51) CGA....SLVRGWNIQEHVVRMV..VKLLSPPlpsdSSL
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 54.36| 17| 170| 308| 331| 3
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308- 331 (19.54/24.24) YQPNNKrLVGvlGNlrssNSMLGQ
484- 500 (34.82/16.85) FRANCK.VVG..GN....PSMIGQ
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 101.75| 34| 162| 92| 131| 4
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92- 131 (45.41/34.24) RLLCpLHVLALLTarVLPQRRAQPEAYRLYLE.LLKgnvTS
256- 290 (56.34/25.77) RLIC.LNMPDKFS..VLSQRLTLIEAHKMALErLLP...TS
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 84.34| 25| 1068| 163| 188| 7
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163- 188 (39.77/32.65) GTDFG...HVVILFVLIVItKLIDCVLED
1231- 1258 (44.57/31.50) GCDPGtwkAYVSCFVFLVV.KFVPTWLRD
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Explaination for Stockholm format The "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column. It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column. This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.#=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.
Alignment of MDP22466 with Med33 domain of Kingdom Viridiplantae
Intrinsically Disordered Regions
IDR Sequence Start Stop
NA NA NA
