<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22466

Description Uncharacterized protein
SequenceMGAAEAPALAAAPAAGGGGELLERRVMAAVKASEARGDPPLLRAVEISRLAAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSFSLSLLAGPNRDKITKSIDAALQLSKSYGVSGTDFGHVVILFVLIVITKLIDCVLEDCGISSGMTQEQESVYPTEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMSLEVLHIMAADRKIQAFLRLICLNMPDKFSVLSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYPGLLVPPSSLVNVANAAASKAAIFRANCKVVGGNPSMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQSCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHVKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASRLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWHENDLALSLLERGGPKAISAVVETLLQ
Length1301
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.163
Instability index48.57
Isoelectric point8.12
Molecular weight140481.44
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22466
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     467.76|     137|     161|     777|     937|       1
---------------------------------------------------------------------------
  777-  909 (166.67/133.69)	................................GLGntnPV.HQVANKILSM.ICRKITKS.....G..VVSGNLSSASSSSVSGSSLSTSDDSyqrPTLPA.WEFLEAVPYVL....EAVLTAC...SHGRISSRDMTTSLRD..LVDFL...PASLAAIV......SYFSAEIT..RGIwkAVPMngtewpSPG
  910- 1068 (156.84/113.13)	AALHsiedevKEILASAGV..QIHSCyprgvpPML...PL.PMAA..LVSLtITFKLDRSldyihG..IIGQALENCAGGS.SWPSM.........PIIGAlW..TQKVRRWH....DFIVLSCirsPFGR..DKDAVAQLIQscFSSFLrssPSSGSDITasrgvgALMGESITghQGL..HFPM......APG
 1076- 1190 (144.25/84.63)	RTFH......DTYFVSEMIlrQVIDC..............sHKLANGWSSN.GPPHV.KS.....GrpPLSGAASMASQVAMLGAGLLCVAGG...PLLVQ.VLYEETLPTLLlsaqEQMLE.....DPGPVASRLQGYAMAN..ML.FF...CGSL......................................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      91.86|      29|     161|     389|     470|       2
---------------------------------------------------------------------------
  436-  470 (42.61/88.34)	CGAegnkSLPRRLGLVSSLQDLVqyPGLLVPP....SSL
  604-  636 (49.25/ 9.51)	CGA....SLVRGWNIQEHVVRMV..VKLLSPPlpsdSSL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      54.36|      17|     170|     308|     331|       3
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  308-  331 (19.54/24.24)	YQPNNKrLVGvlGNlrssNSMLGQ
  484-  500 (34.82/16.85)	FRANCK.VVG..GN....PSMIGQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     101.75|      34|     162|      92|     131|       4
---------------------------------------------------------------------------
   92-  131 (45.41/34.24)	RLLCpLHVLALLTarVLPQRRAQPEAYRLYLE.LLKgnvTS
  256-  290 (56.34/25.77)	RLIC.LNMPDKFS..VLSQRLTLIEAHKMALErLLP...TS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.34|      25|    1068|     163|     188|       7
---------------------------------------------------------------------------
  163-  188 (39.77/32.65)	GTDFG...HVVILFVLIVItKLIDCVLED
 1231- 1258 (44.57/31.50)	GCDPGtwkAYVSCFVFLVV.KFVPTWLRD
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22466 with Med33 domain of Kingdom Viridiplantae
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