<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22465

Description Uncharacterized protein
SequenceMAATGGGSGGGGGGRHWIEAEMPDFRARMRRIYLPTKLASYFQPKYSPNSLEAQTLIARLEEDAFRGTNSKVEYVKKISDKVVTVLRNKTDELQRRAQLQSQLQQALHGGSSSVMPEAVMVASRRPTSQSMTPQTSGQVPNQHMLHPCTSNMQIEVEKKHHAQGHYPNFQPMGITRAGPGVQSGPWPMQSGASQSENPYIAKQPQATNFVGYSLASGSKPVIRPNSQHNHLLGQNDSAIGVRQPQITRLNEILRANQQLMGTQRYQMLGAQQADVPKMQPGQIRIRNNQEDARQTGLLHPPFKASEPMTPPVQQIPGAQQSTLFCQNSQIPVTMSDISAMMGTAREYDPKEEIFCKIKSWKDAYFPQFLELDRRVVLPTLTEKSDVHEGLKVDLPKYEKLIHHFLALLERNKTCHANMNTGYQLQNCDEQRTTVNLTGNAFPISGGTSREQKQPADPSILQPRQTTMARTTTPHQQSNGNYLPGIESPFSSPGSLQSWSSSMLEALRPSPLANPVVAPASACAPIPMISMDVDSITAFLMNDNATAPPPKANGSNQVTPTEPIATASPLQADIAAGHGEVQARGGDGTPVTKRPIDRLMDAIRSSLPGALRSSVNSIRSLLSMSDIEPHGKIGTMLDCRSSLQQQQQGGSNTVNKMKQVFNHTESQSESQPLGSMDGSCMSFECGALDSGSNSEVNFKRQETQNASNEALLEEIKSINNTLIDTVVSISDNCGMDGISRCDGGTTIKLSYSAVSLSPTFKSFFATSEMCLVLPVKLYVPADYPGSSPVLRNDEGDEVPSTISASADVAFRHALDGLLEPRSIEAMVRVWDASVRKAVTRFAERQGGGTASSMFGGWKRCAAT
Length862
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.501
Instability index59.86
Isoelectric point8.13
Molecular weight93746.74
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22465
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             6|     640.64|     102|     102|     524|     625|       1
---------------------------------------------------------------------------
  185-  275 (77.42/37.84)	....................................P...WPMQSGASQSENPYI......A.....KQPQATnfvGYSLA.SGSK...PVI..RP........NSQHNHLLG.QNDSAIGVR.QPQITR..LneilranqqlMG.TQRY....QMLGAQQADV.............
  276-  384 (91.91/46.42)	.........................................P..KMQPGQIRIRNNQEDARQtgllhPPFKA.....SEPM.TPPVqqiPGAQQSTLfcqNSQIPVTMSDISA.MM..GTARE.YDPKEE..I..........FC.KIKSwkdaYFPQFLELDRRV..VlPTLTEKS
  385-  520 (112.16/58.41)	DvheglkvdlpkyeklihhflallernktchanmntG...YQLQNCD.EQRTTVNLTGNAF......PISGGT...SREQK.QPAD...P.SILQPR...QTTMARTTTPHQQ.SNGNYLPGI.ESPFSSpgS..........LQ.SWSS....SMLEALRPSPLA..N.PVVAPAS
  521-  624 (152.58/82.33)	A.................................caP...IPMISMDVDSITAFLMNDNATA.....PPPKAN...GSNQV.TPTE...PIATASPL...QADIAAGHGEVQA.RGGDGTPVT.KRPIDR..L..........MD.AIRS....SLPGALRSSVNS..I.RSLLSMS
  625-  729 (98.33/50.22)	D.................................ieP...HGKIGTMLDCRSS..LQQQQQG.....GSNTVN...KMKQVfNHTE...SQSESQPL..gSMDGSCMSFECGAlDSGSNSEVNfKR..QE..T..........QN.ASNE....ALLEEIKSINN.tlI.DTVVSIS
  730-  829 (108.25/56.09)	D....................................ncgMDGIS.RCDGGTTIKLSYSAVS.....LSPTFKsffATSEM.CLVL...PVKLYVP.....ADYPGSSPVLRN.DEGDEVPST....ISA..S..........ADvAFRH....ALDGLLEP..RS..I.EAMVRVW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     148.66|      36|      39|     102|     140|       2
---------------------------------------------------------------------------
   62-  100 (36.34/14.88)	EDAFRGTNSKVeyvkkISDKV...VTVLRNKTDE.LQRRAQLQ..
  104-  140 (56.44/39.92)	QQALHGGSSSV.....MPEAV...MVASRRPTSQSMTPQTSGQvP
  142-  179 (55.87/29.33)	QHMLHPCTSNM.....QIEVEkkhHAQGHYPNFQPMGITRAG..P
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22465 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) IGTMLDCRSSLQQQQQGGSNTVNKMKQVFNHTESQSESQPL
2) NLTGNAFPISGGTSREQKQPADPSILQPRQTTMARTTTPHQQSNGNYLPGIESPFS
3) QRYQMLGAQQADVPKMQPGQIRIRNNQEDARQTGLLHPPFKASEPMTPPVQQIPGAQQ
4) TAFLMNDNATAPPPKANGSNQVTPTEPIATASPLQADIAAGHGEVQARGGDGTPVTKRPIDRLMDAIRS
5) VGYSLASGSKPVIRPNSQHNHLLGQNDSAIGVRQPQITR
6) VLRNKTDELQRRAQLQSQLQQALHGGSSSVMPEAVMVASRRPTSQSMTPQTSGQVPNQHMLHPCTSNMQIEVEKKHHAQGHYPNFQPMGITRAGPGVQSGPWPMQSGASQSENPYIAKQPQATN
632
435
263
536
210
85
672
490
320
604
248
208










Molecular Recognition Features






MoRF SequenceStartStop




NANANA