<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22456

Description Uncharacterized protein
SequenceMQGSNKLNAGSSCNDKPPKVNWPHHANAIQSSLSKDDFLSSSFLFSLPTQRANPEANCNTMLSLRSAACKIQGPERLQVPWIEKAWRSVCNTQVTCKNYLRPGLSAKESLHRRTESGILEQNNSHRLASTCTTAYRSNYVVGTTYQSSFARTDAMSCQTVPVADNMCADDKLDAMDDDEILASIDVDRIVMEHYEATNTPRGLASRQMSTPSGNKCNFTGSDDNSLPQELSEICSHGYKLAFCPELNYHLQGMKDQLIAVSNKLLDGSGELNPQHSEELRQQRAHLNKQIQILGDYMARPTQDDERQRSHSMASTTAAEGHHPPMTPSTFVDNNRSQSQFYDMNGPWDGGSCYTPAPCTYMDSNIPLTSVQRDYTRRNIDISYTDGSGDKKWSSTDFPWTKELEVHNKRVFGNRSFRPNQREIINATMNGSDVFVLMPTGGGKSLTYQLPALIDEGITLVVCPLVSLIQDQIMHLSQANIPATYLSANLEWTEQQRILRDLMSPTSTCNYKLLYVTPEKIAKSDALLRQLEILYSRGYLCRIVIDEAHCVSQWGHDFRPDYQHLGLLKQKFPETPVLALTATATASVKEDVVQALGLANCVVFKQSFNRPNLRYIVMPKTKKCLEDIDCFIRENHPKECGIIYCLSRMDCEKVAEKLREFGHQARHYHGSMEPSDRAAVQRLWSMDKINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMITQGSAEQVRSSSSSSHGQALATHKENLLCMVSYCENDVDCRRLLQLIHFGETFDPSHCSKTCDNCKKGLRWIEKDVTNIAKQLVELVLATRQSCSSSHILEVYRGSLNQNVKKNRHDNLPLHGAGKNLAKGEAARVLRHLVTEGILTEDVKKSDMYGSVSSVLKANQVKVGGLRSGNQIVLKFPTADKAPKMGKLDESSISQVNKTVQRQSEMDENFSSLLYETLRILRSQIAEGTAGCGVHHIFKNETLKEISTRIPRTKEELLEINGIG
Length1024
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy-0.501
Instability index51.22
Isoelectric point7.94
Molecular weight114820.85
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
3'-5' DNA helicase activity	GO:0043138	IEA:InterPro
ATP binding	GO:0005524	IEA:UniProtKB-KW
nucleic acid binding	GO:0003676	IEA:InterPro

GO - Biological Process
DNA recombination	GO:0006310	IEA:InterPro
DNA repair	GO:0006281	IEA:InterPro
DNA replication	GO:0006260	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22456
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     318.25|      90|     117|     210|     302|       1
---------------------------------------------------------------------------
  210-  277 (106.73/62.63)	................................................TPS....GNKCNFTGSDDNSLPQELSEICSHGYKLAFCPEL..NYHLQGMKDQLI..AVSNKLLDGSGELNPQHSE
  278-  396 (114.19/77.83)	ELRQQRAHlNKqiQILGDYMARPTQdderqrshsmasttaaeghhppmTPStfvdNNRSQSQFYDMNG.PWDGGS.C...YTPAPCTYMdsNIPLTSVQRDYTrrNIDISYTDGSGDKKWSSTD
  399-  477 (97.33/57.16)	WTKELEVH.NK..RVFGNRSFRPNQ..............reiinatmnGSD....VFVLMPTGG.GKSLTYQLPALIDEGITLVVCPLV..SL....IQDQIM..HLSQ...............
---------------------------------------------------------------------------
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     376.36|     119|     140|     637|     764|       2
---------------------------------------------------------------------------
  637-  764 (195.43/145.61)	KE...CGIIYCLSRMDCEKVAeKLREFGHQARHYHGSmEPSDRAAVQRLW.SMDKINI....ICATVAFGMGINKPDVRFVIHHSLPKSI.EGYHQECGRAGrDGQRsscvlyYNYSDYIRV.KHMITQG.SAEQVRSS
  777-  906 (180.93/111.42)	KEnllCMVSYCENDVDCRRLL.QLIHFGETFDPSHCS.KTCDNCKKGLRWiEKDVTNIakqlVELVLATRQSCSSSHILEVYRGSLNQNVkKNRHDNLPLHG.AGKN......LAKGEAARVlRHLVTEGiLTEDVKKS
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.77|      34|     390|     594|     628|       3
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  594-  628 (56.94/47.89)	ALGLANCVVfKQSFNRPNLRYIV..MPKTKKCLEDID
  986- 1021 (54.83/40.09)	AEGTAGCGV.HHIFKNETLKEIStrIPRTKEELLEIN
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22456 with Med34 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) QIQILGDYMARPTQDDERQRSHSMASTTAAEGHHPPMTPSTFVDNNRSQSQFY
289
341










Molecular Recognition Features






MoRF SequenceStartStop




NANANA