<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22450

Description Uncharacterized protein
SequenceMAPPSRDVGYWVNFFRGGGETILDAIEGAIDVAASEQPAALRARRDAIAERLYTALLLASSGAPTAAAAAAAAARPQAGAPAAVPQAQAQQQEQLLPEGAASVPSLCSSDRAEAITDDGAPRHDDDSVAAEAEKIKAVLVNYQEKSEAALLDLLRRLQQLEFTVHTLKVTAIGKTVGTLRKHNSKQIRHLVRLLIGGWKSIVDEWMSNGGSGDAIVDHTPQSMHPSSLEQEDRGMSSPSVDEGALFATPSTSIRLSEDNQGSRMFDGMDDAGNTRNSVQRHPGSQEPIRRPPQPVAQQYDPDQSWRQEQSAARQSRPQELANGQTREQFIAAMLAKPPNAESGRGRPQVRPKQQQGASPAQGRPQPVPSDKPAGNPDANSLRAKLDLAKNAKLELATNSKLEMTKRKLQEGYQEFDNAKKQRTVQMVDPQDIKKQGNRAWQPNAKPRNNNSSSNTNNNRNWSSK
Length464
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.800
Instability index56.65
Isoelectric point8.99
Molecular weight50303.31
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22450
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     209.87|      45|      54|     208|     254|       1
---------------------------------------------------------------------------
  208-  254 (74.48/34.67)	NGGSG..DAIVD..HTPQSM..HPSSLEQEDRGMSSPSVDEGAlfATP.STSIR
  259-  306 (64.39/25.46)	NQGSRmfDGMDDagNTRNSVqrHPGSQEPIRRP.PQPVAQQ....YDP.DQSWR
  339-  382 (71.01/28.71)	NAESG..RGRPQ..VRPKQQ..QGASPAQ.GRPQPVPS.DKPA..GNPdANSLR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      50.81|      16|      18|      62|      79|       2
---------------------------------------------------------------------------
   62-   77 (25.34/ 8.09)	GAPTAAAAAAAAARPQ
   79-   94 (25.46/ 8.18)	GAPAAVPQAQAQQQEQ
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22450 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GGSGDAIVDHTPQSMHPSSLEQEDRGMSSPSVDEGALFATPSTSIRLSEDNQGSRMFDGMDDAGNTRNSVQRHPGSQEPIRRPPQPVAQQYDPDQSWRQEQSAARQSRPQELANGQTREQFIAAMLAKPPNAESGRGRPQVRPKQQQGASPAQGRPQPVPSDKPAGNPDANSLRAKLDLAKNAKLELATNSKLEMTKRKLQEGYQEFDNAKKQRTVQMVDPQDIKKQGNRAWQPNAKPRNNNSSSNTNNNRNWSSK
209
464










Molecular Recognition Features






MoRF SequenceStartStop




1) FIAAML
329
334