<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22449

Description Uncharacterized protein
SequenceMGAAEAPTLAGAGGELLERRVMAAVKASEARGDPPLLRAVEISRLVAGEPGAGVPSADLAGILVSNLCFAHNSPSLWKLLDQAMSSRLLCPLHVLALLTARVLPQRRAQPEAYRLYLELLKGNVTSSSLSLLAGPNRDKITKSIDAALQLSKTYGVSGTDFGHVVILFVLIVITKLIDSVLEDCGISSGTTLEQESVYPNEGPQPMDMDVKGVSAVKQNEQREQLRRKNTVMALEVLHMMAADRKIQAFLRLICINMPDKFSALSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANAAASKAAIFRANCKVGGNPGMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVRLELTLDYLVLMHNSRIEFPNSSATSTNSGSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQGCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWQEHDLALSLLERGGPKAISAVVETLLQ
Length1325
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.146
Instability index46.83
Isoelectric point7.88
Molecular weight143204.35
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22449
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     390.30|      72|      78|     986|    1057|       1
---------------------------------------------------------------------------
  772-  842 (69.41/47.12)	....PT......QPIyIDSF....PKLRAWY......IQ..NQAC....IASTLSglG..NTNPVHQVANKILSM....ICRK...............itksGVVSGNLSSASSSSVS
  843-  918 (52.55/33.34)	GSSLSTsddsyqRPT.LPA.WefLEAVPYVL...E..AV..LTAC.......SHG..RisSRDMTTSLRD..LVD....FL.............paslaaivSYFSAEITRGI.....
  919- 1002 (76.85/53.21)	...WKA......VPM.NGTEW..PSPGAALHsieD..EVkeILASagvqIHSCYP..R..GVPPMLPLPMAALVS.....LTI...tfkldrsL........DYIHGIIGQALENCAG
 1003- 1081 (110.34/80.59)	GSSWPS......MPI.IGALW..TQKVRRWH...D..FI..VLSC....IRSPFG..R..DKDAVAQLIQGCFSS....FLRS...spssgsdI........TASRGVGALMGESITG
 1084- 1164 (81.15/56.72)	GLHFPM......AP...GFIY..LRTCRTFH...DtyFV..SEMI....LRQVI........DCSHKLANG.WSSngppHLKSgrpplsgaasM........ASQVAMLGAGLLCVAG
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     207.32|      73|     160|     275|     433|       2
---------------------------------------------------------------------------
    3-   88 (103.54/32.43)	AAEAPTLAGAGG.ELLERRVMAAVKASEARGDpPLLRAVEIS..RLV..AGEPGAG.VPSADlagilvSNLCFahnspsLWKLLDQAMSSRL
  346-  424 (103.78/173.04)	AMDGRHLGGISAiEIIKEMSKTAQAINEASWQ.ETFKALWISalRLVqrAREPLEGpIPHLD......TRLCM......LLALIPLAIAAIL
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     108.31|      35|     158|     272|     313|       3
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  272-  313 (47.94/46.51)	EAHKmALERLLPTSHKIDDLVMYiwrvSNLDYQPNNkrLVGV
  434-  468 (60.36/34.77)	EGNK.SLPRRLGLVSSLQDLVQY....SGLLVPPSS..LVNV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     253.81|      82|    1097|     112|     204|       5
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  119-  204 (131.53/105.86)	LLKGNVTSSS...LSLLA......GPNRDKITKSIDAALQLsktyGVSGTDFGHVVILFVLIVI....TKLIDSVLEDC.GISSGTTLEQE.....SVYPNEGPQ
 1214- 1314 (122.28/75.22)	LLWGSEKTSPimkLSFLSrrprvvGTHMDFIAGVLDGHILL....GCDPGTWKAYVSCFVFLVVkfvpTWLRDIKLDTLkKIAAGLRSWQEhdlalSLLERGGPK
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22449 with Med33 domain of Kingdom Viridiplantae
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