<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22448

Description Uncharacterized protein
SequenceMALEVLHMMAADRKIQAFLRLICINMPDKFSALSQRLTLIEAHKMALERLLPTSHKIDDLVMYIWRVSNLDYQPNNKRLVGVLGNLRSSNSMLGQLTGAGRAACWIIFDIYMENAMDGRHLGGISAIEIIKEMSKTAQAINEASWQETFKALWISALRLVQRAREPLEGPIPHLDTRLCMLLALIPLAIAAILKEETDACGAEGNKSLPRRLGLVSSLQDLVQYSGLLVPPSSLVNVANAAASKAAIFRANCKVGGNPGMIGQSDSSTKAVGNMLHLIVEACISRNLIDTTAYLWPGYVVLPGHSKDTSLPQESPWVNFMQGAPLSDPLKNALIATPASSVAELDKLYHIALNGSEQEKSAAAKIVCGASLVRGWNIQEHVVRMVVKLLSPPLPSDSSLQGSMSHYLSQKSTLNAILLGVSYVDAVHIFSLYGMVPDVAAALMPLCEAFGSMPPPSNHRSTIVDETSVYSVFSCAFLCLLRLWKFYKPPQEYCLAGRGGSVSSTGSFDEVPTQPIYIDSFPKLRAWYIQNQACIASTLSGLGNTNPVHQVANKILSMICRKITKSGVVSGNLSSASSSSVSGSSLSTSDDSYQRPTLPAWEFLEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRGIWKAVPMNGTEWPSPGAALHSIEDEVKEILASAGVQIHSCYPRGVPPMLPLPMAALVSLTITFKLDRSLDYIHGIIGQALENCAGGSSWPSMPIIGALWTQKVRRWHDFIVLSCIRSPFGRDKDAVAQLIQGCFSSFLRSSPSSGSDITASRGVGALMGESITGHQGLHFPMAPGFIYLRTCRTFHDTYFVSEMILRQVIDCSHKLANGWSSNGPPHLKSGRPPLSGAASMASQVAMLGAGLLCVAGGPLLVQVLYEETLPTLLLSAQEQMLEDPGPVASTLQGYAMANMLFFCGSLLWGSEKTSPIMKLSFLSRRPRVVGTHMDFIAGVLDGHILLGCDPGTWKAYVSCFVFLVVKFVPTWLRDIKLDTLKKIAAGLRSWQEHDLALSLLERGGPKAISAVVETLLQ
Length1064
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy0.177
Instability index47.10
Isoelectric point8.07
Molecular weight115223.46
Publications









Function






Annotated function


GO - Cellular Component
mediator complex	GO:0016592	IEA:InterPro

GO - Biological Function
GO - Biological Process
regulation of phenylpropanoid metabolic process	GO:2000762	IEA:InterPro









Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22448
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     105.63|      31|      72|     496|     526|       1
---------------------------------------------------------------------------
  450-  483 (49.01/29.39)	GSMPPPSNHRStiVDETSVYSVFSCAFlCLLRLW
  496-  526 (56.62/35.14)	GRGGSVSSTGS..FDEVPTQPIYIDSF.PKLRAW
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     147.79|      48|      77|     320|     369|       3
---------------------------------------------------------------------------
  320-  369 (69.81/58.56)	MQGApLSDPL..KNALIATpASSVAELDKLYHIALNGSEQEKSAAAKIVCGA
  399-  448 (77.98/53.88)	LQGS.MSHYLsqKSTLNAI.LLGVSYVDAVHIFSLYGMVPDVAAALMPLCEA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     177.70|      60|     158|      12|      82|       4
---------------------------------------------------------------------------
   12-   82 (82.65/107.59)	DRKIQAFLRLIcinmPDKFSALSQRLT...LIEAHKmALERLLPTSHKIDDLVMYiwrvSNLDYQPNNkrLVGV
  175-  237 (95.06/78.38)	DTRLCMLLALI....PLAIAAILKEETdacGAEGNK.SLPRRLGLVSSLQDLVQY....SGLLVPPSS..LVNV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     192.43|      61|     165|     781|     868|       5
---------------------------------------------------------------------------
  737-  775 (52.35/17.59)	.........................................ENCAG..GSSWPSMPiiGALWTQKVRRWHD..FIVLSCIRSPF
  780-  856 (87.64/75.73)	D...avaqliqgcfssFLRSS..PSSGSDITASRgVgALMGESITGHQGLHFPMAP..GFIYLRTCRTFHDtyFVSEMILRQVI
  857-  919 (52.44/39.25)	DcshklangwssngppHLKSGrpPLSGAASMASQ.V.AMLGAGLLCVAG..GPLLV..QVLYEETLPTL...............
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      70.30|      22|      41|     567|     588|       6
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  567-  588 (33.46/18.80)	VVSGNLSSASSSSVSGSSLSTS
  609-  630 (36.84/21.45)	VLEAVLTACSHGRISSRDMTTS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22448 with Med33 domain of Kingdom Viridiplantae
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