<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22447

Description Uncharacterized protein
SequenceMAATGGGSGGGGGGRQWIEAETPDFRARMRRIYLPTKLATYFQHKYSPNSMEAQTLIARLEEDAFRGTNSKVEYVKKISDKVVTMLRNKTDELQRRAQLQSQLQQAIEAQALHGGSSSVMPEAVMVASRRPTSLSMTPQTSGLVPNQNILHPCTSNMQIEVEKKHHGQDHYPNFQPMGITSAEPGVQSGPWTMQSGASQSESQYMARQPQATNFVGYSLANGSKPVIQPNSQHNHILGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQTLGAQQADASNMQPGQLRIRNNQEDARQTGFLHPPFKASEPMTPPVQQIPGAQQSTLFCQNSQIPAMMRSTTVYDLEEIFCKIKSWKDAYFPQFLELDRRVILPTLTEEQFSSLPEEKANQYKRKADFKKSIRRILNLMSLQRSDVHKGLKVDLPKYEKLIHHFLALLERNKTCHAEMNTGYQLQNCDEQRKAINLTGNASPISGGAREQKQPADASILQPRQTTMARTTTPHQQSNDNYLLGTESASFSSPGSLQSWSSSMPKSMRPSPHANPVVAPVSPCAPVPIISMDVDSITAFLMDDNAAAALPPKANGSNQVTPTEPIVPASPLQADIAAGHGEVQARGGDGTPMTKRPIDRLMDAIRSSSPGALRSSVNSIRSFLSMSDIVPHGRIGTMLDCKSSLQQQGGSNTVNKMKRVFNHTVSRSESLPLRSMDGSCMSFECGASDSGSSSEVNFKRQKTQNASNEALLEEIKSINNTLIDTVLSISDYCGMDGISRCDGGTTIKLSYSAVSLSLTFKSVFATSEACLVLPVKLFVPADYPSSSPVLRNDERDEVPRKNSSAISASAEAMARAWDASVRKAVMRFARQQGGGTISSMFGGWKRCAAA
Length879
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.522
Instability index63.25
Isoelectric point9.11
Molecular weight96160.59
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IEA:InterPro
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22447
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     153.19|      38|      39|     173|     210|       1
---------------------------------------------------------------------------
  173-  205 (55.31/27.99)	....................................NFQPMGI...T.SAEPGVQSGPWTMQSGA.SQS.....ESQYM
  206-  245 (46.86/22.58)	ARQPQ.............................atNFVGYSL...AnGSKPVIQ..PNSQHNHIlGQN.....DSAIG
  246-  310 (25.21/ 8.71)	VRQPQitrlneilranqqemgtqryqtlgaqqadasNMQPGQLrirN.NQEDARQTGFLHPPFKA.S............
  312-  336 (25.81/ 9.10)	.......................................PM.........TPPVQQIP.....GA.QQStlfcqNSQIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     103.06|      39|      39|     646|     684|       2
---------------------------------------------------------------------------
  646-  664 (21.90/ 8.79)	.........................................VNS.I...RSF...LSMSDIVPHGRI
  665-  705 (49.22/28.83)	GTMLDCKSSLQQQGGSNTVN..........................kmkRVFnhtVSRSESLPLRSM
  707-  760 (31.95/16.17)	GSCMSFECGASDSGSSSEVNfkrqktqnasnealleeiksiNNTlI...DTV...LSISD.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     138.02|      40|     337|      15|      54|       3
---------------------------------------------------------------------------
   15-   54 (73.14/60.32)	RQWIEAETPDFRARMRRI.Y...LPTKLATYFQHKYSPNSMEAQ
   61-   98 (37.24/26.53)	......EEDAFRGTNSKVeYvkkISDKVVTMLRNKTDELQRRAQ
  355-  376 (27.64/17.48)	KSWKDAYFPQFLELDRRV.I...LPT..................
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      68.57|      14|      35|     490|     503|       4
---------------------------------------------------------------------------
  127-  138 (18.51/ 6.54)	ASRRPTSL..SMTP
  490-  503 (23.41/10.03)	LQPRQTTMARTTTP
  526-  539 (26.64/12.33)	LQSWSSSMPKSMRP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      61.10|      17|      43|     547|     563|       6
---------------------------------------------------------------------------
  547-  563 (31.26/20.84)	VAPVSPCAPVPIISMDV
  589-  605 (29.85/19.52)	VTPTEPIVPASPLQADI
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22447 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AINLTGNASPISGGAREQKQPADASILQPRQTTMARTTTPHQQSNDNYLLGTES
2) MLRNKTDELQRRAQLQSQLQQAIEAQALHG
3) NAAAALPPKANGSNQVTPTEPIVPASPLQADIAAGHGEVQARGGDGTPMTKRPIDRLMDAIRSSSPG
4) SPGSLQSWSSSMPKSMRPSPHANPVVAPVS
5) SVMPEAVMVASRRPTSLSMTPQTSGLVPNQNILHPCTSNMQIEVEKKHHGQDHYPNFQPMGITSAEPGVQSGPWTMQSGASQSESQYMARQPQATNFVGYSLANGSKPVIQPNSQHNHILGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQTLGAQQADASNMQPGQLRIRNNQEDARQTGFLHPPFKASEPMTPPVQQIPGAQQ
464
85
574
522
118
517
114
640
551
325










Molecular Recognition Features






MoRF SequenceStartStop




NANANA