<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22446

Description Uncharacterized protein
SequenceMAATGGGSGGGGGGRQWIEAETPDFRARMRRIYLPTKLATYFQHKYSPNSMEAQTLIARLEEDAFRGTNSKVEYVKKISDKVVTMLRNKTDELQRRAQLQSQLQQAIEAQALHGGSSSVMPEAVMVASRRPTSLSMTPQTSGLVPNQNILHPCTSNMQIEVEKKHHGQDHYPNFQPMGITSAEPGVQSGPWTMQSGASQSESQYMARQPQATNFVGYSLANGSKPVIQPNSQHNHILGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQTLGAQQADASNMQPGQLRIRNNQEDARQTGFLHPPFKASEPMTPPVQQIPGAQQSTLFCQNSQIPAMMRSTTVYDLEEIFCKIKSWKDAYFPQFLELDRRVILPTLTEEQFSSLPEEKANQYKRKADFKKSIRRILNLMSLQRSDVHKGLKVDLPKYEKLIHHFLALLERNKTCHAEMNTGYQLQNCDEQRKAINLTGNASPISGGASREQKQPADASILQPRQTTMARTTTPHQQSNDNYLLGTESASFSSPGSLQSWSSSMPKSMRPSPHANPVVAPVSPCAPVPIISMDVDSITAFLMDDNAAAALPPKANGSNQVTPTEPIVPASPLQADIAAGHGEVQARGGDGTPMTKRPIDRLMDAIRSSSPGALRSSVNSIRSFLSMSDIVPHGRIGTMLDCKSSLQQQGGSNTVNKMKRVFNHTVSRSESLPLRSMDGSCMSFECGASDSGSSSEVNFKRQKTQNASNEALLEEIKSINNTLIDTVLSISDYCGMDGISRCDGGTTIKLSYSAVSLSLTFKSVFATSEACLVLPVKLFVPADYPSSSPVLRNDERDEVPRKNSSAISASAEAMARAWDASVRKAVMRFARQQGGGTISSMFGGWKRCAAA
Length880
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.522
Instability index63.41
Isoelectric point9.11
Molecular weight96247.67
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
chromatin DNA binding	GO:0031490	IBA:GO_Central
transcription coactivator activity	GO:0003713	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22446
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     153.19|      38|      39|     173|     210|       1
---------------------------------------------------------------------------
  173-  205 (55.31/23.79)	....................................NFQPMGI...T.SAEPGVQSGPWTMQSGA.SQS.....ESQYM
  206-  245 (46.86/19.17)	ARQPQ.............................atNFVGYSL...AnGSKPVIQ..PNSQHNHIlGQN.....DSAIG
  246-  310 (25.21/ 7.34)	VRQPQitrlneilranqqemgtqryqtlgaqqadasNMQPGQLrirN.NQEDARQTGFLHPPFKA.S............
  312-  336 (25.81/ 7.67)	.......................................PM.........TPPVQQIP.....GA.QQStlfcqNSQIP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      93.37|      27|      44|     534|     564|       2
---------------------------------------------------------------------------
  534-  564 (45.77/31.33)	MPksmrPSPHANPVVAPVSPCAPVPIISMDV
  580-  606 (47.61/24.06)	LP....PKANGSNQVTPTEPIVPASPLQADI
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     111.01|      36|      45|      37|      72|       3
---------------------------------------------------------------------------
   37-   72 (59.99/46.64)	KLATYFQHKYSPNSMEAQ...TLIARLEEDAFRGTNSKV
   81-  119 (51.03/38.38)	KVVTMLRNKTDELQRRAQlqsQLQQAIEAQALHGGSSSV
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      84.11|      22|     338|      15|      36|       4
---------------------------------------------------------------------------
   15-   36 (42.51/28.68)	RQWIEAETPDFRARMRRIYLPT
  355-  376 (41.61/27.92)	KSWKDAYFPQFLELDRRVILPT
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     106.61|      35|      38|     622|     658|       5
---------------------------------------------------------------------------
  622-  658 (54.23/41.82)	PMTKrpIDRLMDAIRSSSPGALRSSVNSI.RSF...LSMSD
  661-  699 (52.38/33.09)	PHGR..IGTMLDCKSSLQQQGGSNTVNKMkRVFnhtVSRSE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      90.06|      27|      49|     761|     787|       7
---------------------------------------------------------------------------
  761-  787 (48.80/28.93)	DYCGMDGISRCDGGTTI.KLSYSAVSLS
  812-  839 (41.27/23.41)	DYPSSSPVLRNDERDEVpRKNSSAISAS
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22446 with Med15 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AINLTGNASPISGGASREQKQPADASILQPRQTTMARTTTPHQQSNDNYLLGTES
2) MLRNKTDELQRRAQLQSQLQQAIEAQALHG
3) NAAAALPPKANGSNQVTPTEPIVPASPLQADIAAGHGEVQARGGDGTPMTKRPIDRLMDAIRSSSPG
4) SPGSLQSWSSSMPKSMRPSPHANPVVAPVS
5) SVMPEAVMVASRRPTSLSMTPQTSGLVPNQNILHPCTSNMQIEVEKKHHGQDHYPNFQPMGITSAEPGVQSGPWTMQSGASQSESQYMARQPQATNFVGYSLANGSKPVIQPNSQHNHILGQNDSAIGVRQPQITRLNEILRANQQEMGTQRYQTLGAQQADASNMQPGQLRIRNNQEDARQTGFLHPPFKASEPMTPPVQQIPGAQQ
464
85
575
523
118
518
114
641
552
325










Molecular Recognition Features






MoRF SequenceStartStop




NANANA