<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22443

Description Uncharacterized protein
SequenceMADDGLDRWRGFFRGAGVGICEAIEKAILVAAADEPQEFLRRRDRIAERLFNALLARPSCHGCTASTGSVPPATPAVAEDKGSVRRVPEKDCKVDSSSLGAPGGGALGGGISEDDDSDSEDDERLRRAAASNYGHNYDDDNDVEEEQDAAAPAEEDHHAEDDDPEAEELEALTNEIDEESQIVGEVLRIKELLLHKQDHSDATLFDSLRRLQLMQLSVSTLKATEIGRAVNGLRKHSSQQIRHLALALIQDWKILVDEWVSTTNVALADNSPGTSNPSVVDDDEEEEGLPSPPLDEGAFFAPETTAIQLSEFFDEMDEDGNLRHNNDVRLGNKRENNGRRPANHSTVSKPELTRPVGTVERDQFRRPELTRQEPPMRHTNQQKPQGSNLQAKPHGMLNKQSRPLSSDSGSMRPMKAATQQKPIGEMKYKQTQEHFGVERKPAMGHVDASCAAFIRSQVRVGKAKDPGWLGKQRKVGGSQA
Length480
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.820
Instability index61.52
Isoelectric point5.02
Molecular weight52762.61
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22443
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     160.11|      38|      40|     357|     395|       1
---------------------------------------------------------------------------
  299-  344 (27.20/ 9.39)	.......FFAPETT.AiqlseffdemdEDG...NLRHNNDvrlgN.....KRENN..GRRPANH
  358-  394 (62.62/31.22)	.TVERDQFRRPELT.R...........QEP...PMRHTNQ....Q.....KPQGS..NLQAKPH
  395-  434 (45.90/20.35)	GMLNKQS..RP.LS.S...........DSGsmrPMKAATQ....Q.....KPIGEmkYKQTQEH
  436-  466 (24.38/ 8.01)	G.............vE...........RKP...AMGHVDA....ScaafiRSQVR..VGKAKDP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     113.62|      25|      39|      62|      86|       2
---------------------------------------------------------------------------
   21-   42 (30.55/13.53)	.CEAIEKAILVA..AADEPQEFLRR
   62-   86 (42.06/21.02)	GCTASTGSVPPATPAVAEDKGSVRR
  103-  127 (41.00/20.33)	GGGALGGGISEDDDSDSEDDERLRR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      63.22|      18|      20|     128|     145|       3
---------------------------------------------------------------------------
  128-  145 (32.21/20.40)	AAASNYGHNYDDDNDVEE
  151-  168 (31.01/19.36)	APAEEDHHAEDDDPEAEE
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22443 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) GCTASTGSVPPATPAVAEDKGSVRRVPEKDCKVDSSSLGAPGGGALGGGISEDDDSDSEDDERLRRAAASNYGHNYDDDNDVEEEQDAAAPAEEDHHAEDDDPEAEELEALTNEID
2) SEFFDEMDEDGNLRHNNDVRLGNKRENNGRRPANHSTVSKPELTRPVGTVERDQFRRPELTRQEPPMRHTNQQKPQGSNLQAKPHGMLNKQSRPLSSDSGSMRPMKAATQQKPIGEMKYKQTQEHFGVERKPAMGHVDASCAAFIRSQ
3) VALADNSPGTSNPSVVDDDEEEEGLPSPPLDEGAFFA
62
310
265
177
457
301










Molecular Recognition Features






MoRF SequenceStartStop




1) DPGWLGKQRKVGGS
2) ERLRRA
465
123
478
128