<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22437

Description Uncharacterized protein
SequenceMPMLACLLRTNHAVQVPMFAPPASLQPPAPGQLPRLGAPFPGPMAPNPPASIRLPFPVPPRTPNILYGANPQQGNLDVGASKSDAPSAPEVSPHTVQSLPPRPEGFGAVGGSAPGQRPSNLSTPPSLLQRPTGPAPSLPQTSPSGAAPGAVPRATQQQFYPSYPSAPGNPPQPLWGYPPQPTGFQQAPFHSYPPGSLGPLGAPMVGTSSVTTSLPNIQPPGITTGDPKEQPSVNPGSVQSIHTSVEQHPTGLEDRSTAGVQDSDTWSAHKTEAGVLYYYNALTGESTYQRPPGYKGELEKVAAQPVPASWDKIAGTDWSIVTTSDGKKYYYDNKQKVSSWQLPPEVAELNKNADSGNLKGSSTSLQDAGTVANKGEASGEISTPAIQTGGRDSLPLRQTVAPASPSALDLIKKKLQDAGAFSVSSPLATPSSSASELNGSKPADGAPKEQQGSKNGEKSKDNNGNENMSDSSSDSDDEEHGPSKEDCIREFKKMLKERGVAPFSKWEKELPKIVFDSRFKAIPSHSTRRAIFDHFVRTRADEERKEKRAAQKAAVEAYKQLLEEASEGIDSKTGYQDFERKWGADPRFAALDKKEREALFKEKVRALEEKVQSARNAVITDFKSMLRECKDIIPTSRWTKVKENFRSDPRYKAVKHEERENAFNEYIAELKSAEREVEQAAKAKVDEQAKLREREREARKRKEREEQEMERVKLKIRRKDATSSYQALLVETIKDPKASWAESKRKLEKDPQGRAVNPDLGQGEAEKLFREHVKDLYERCVRDFKALLSEAIAPDAATRTTEGGKTVVISWSEAKDLLRSDPRYSKVASKDRESMWWRYADDMVRKLKQPDTEKPDTDARQQRQQRRSSDPPRRR
Length875
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.905
Instability index51.01
Isoelectric point9.03
Molecular weight96208.39
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22437
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     164.65|      26|      26|     132|     157|       1
---------------------------------------------------------------------------
   10-   37 (24.20/ 6.54)	...T...NHA.VQVPMFAPPASlqppAP..GQLPRLG
   38-   62 (39.51/15.89)	AP.F....PG.PMAPNPPASIR....LP..FPVPPRT
  129-  155 (43.47/18.31)	QRpT...GPA.PSLPQTSPSGA....AP..GAVPRAT
  156-  182 (30.39/10.32)	QQqF...YPSyPSAPGNPPQ.......PlwGYPPQPT
  230-  257 (27.08/ 8.30)	QP.SvnpGSV.QSI.HTSVEQH....PT..GLEDRST
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             5|     202.82|      37|      97|     193|     229|       2
---------------------------------------------------------------------------
  100-  126 (40.79/16.90)	PPRPEG.F......G...........A..VGGSA.....PGQRPSN....LST.PPS.
  193-  229 (69.49/34.49)	PPGSLGPL......G...........APMVGTSSVTTSLPNIQPPG....ITTGDPKE
  291-  327 (39.99/16.41)	PPGYKGEL...................EKVAAQPVPASWDKIAGT.dwsiVTTSDGK.
  343-  389 (23.45/ 6.27)	PP.EVAELnknadsGnlkgsstslqdAGTV.ANKGEAS.GEISTPA....IQTG....
  423-  449 (29.11/ 9.74)	.......V......S...........SPLATPSSSASELNGSKP.......ADGAPKE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     314.26|      45|      97|     718|     762|       3
---------------------------------------------------------------------------
  484-  527 (58.19/29.12)	KEDCIREFKKMLKERGV..A..PFS.............KWEK.....ELPKIVFDSRFKAI.PSHST
  551-  592 (40.43/18.08)	QKAAVEAYKQLLEEASEgiD..SKT.............GYQD.....FERKWGADPRFAALD.....
  622-  657 (35.40/14.94)	.......FKSMLREC.K..DiiPTS.............RWTK.....VKENFRSDPRYKAVKHE...
  675-  716 (21.68/ 6.40)	.REVEQAAKAKV.......D..EQA.............KLRErereaRKRKEREEQEMERVKLKI..
  718-  762 (68.69/35.66)	RKDATSSYQALLVETIK..D..PKA.............SWAE.....SKRKLEKDPQGRAVNPDLGQ
  777-  829 (48.50/23.10)	YERCVRDFKALLSEAIA.....PDAatrtteggktvviSWSE.....AKDLLRSDPRYSKV....AS
  832-  871 (41.37/18.66)	RESMWWRYADDMVRKLK..Q..PDT.............EKPD.....TDARQQRQ.QRRSSDP....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      44.26|      13|     166|     595|     607|       4
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  595-  607 (22.20/18.13)	EREALFKEKVRAL
  764-  776 (22.06/17.96)	EAEKLFREHVKDL
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22437 with Med35 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) AKAKVDEQAKLREREREARKRKEREEQEMERVKLKI
2) GAFSVSSPLATPSSSASELNGSKPADGAPKEQQGSKNGEKSKDNNGNENMSDSSSDSDDEEHGPSKEDCIREF
3) QLPPEVAELNKNADSGNLKGSSTSLQDAGTVANKGEASGEISTPAIQTGGRDSLPLRQTVAPASPSALDLIK
4) VPMFAPPASLQPPAPGQLPRLGAPFPGPMAPNPPASIRLPFPVPPRTPNILYGANPQQGNLDVGASKSDAPSAPEVSPHTVQSLPPRPEGFGAVGGSAPGQRPSNLSTPPSLLQRPTGPAPSLPQTSPSGAAPGAVPRATQQQFYPSYPSAPGNPPQPLWGYPPQPTGFQQAPFHSYPPGSLGPLGAPMVGTSSVTTSLPNIQPPGITTGDPKEQPSVNPGSVQSIHTSVEQHPTGLEDRSTAGVQDSDTW
5) VRKLKQPDTEKPDTDARQQRQQRRSSDPPRRR
681
419
341
16
844
716
491
412
266
875










Molecular Recognition Features






MoRF SequenceStartStop




1) ESMWWRYADDMVRKLKQP
2) GKKYYYD
3) LIKKKL
833
326
410
850
332
415