<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22429

Description Uncharacterized protein
SequenceMADDGLDRWRGFFRGAGVSICETIEKAILVAAADEPQEFLRRRDRIAERLFNALLARPSCHGCTASTGSVPPATPAVAEDKGSVRRVPEKESKVDSSSLGAPGGGALGGGISEDEDSDSEDDERLRRAAASNYGHNYDDDNDDEEEEEEQDAAAPAEEDHHAEDDDPEAEELEALTNEIDEESQIVGEVLRIKELLLHKQDHSDATLFDSLRRLQLMQLSVSTLRATEIGRAVNGLRKHSSQQIRHLALALIQDWKILVDEWVSTTNVALADNSPGTSNPSVVDDDDEEEGLPSPPLDEGAFFAPETTAIQLSEFFDEMDEDGNLRHNNDARIGNKRENNGRRPANHSTVSKPELTRPVGTVERDQFRRPELTRQEPPMRHTNQQRPQGSNLQAKPQGMLNKQSRPLSSDSGSMRPMKAATQQKPIGEMKYKQTQEHFGVERKPTMGHVDASCTAFIRSQVRVGKAKDPGWLGKQRKVGSSQA
Length483
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.04
Grand average of hydropathy-0.884
Instability index65.86
Isoelectric point4.89
Molecular weight53332.96
Publications









Function






Annotated function


GO - Cellular Component
nucleus	GO:0005634	IEA:UniProtKB-SubCell

GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22429
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      70.76|      16|      16|     375|     390|       2
---------------------------------------------------------------------------
  375-  390 (33.09/17.89)	QEP...PMRHTNQQ.RPQGS
  393-  409 (19.77/ 8.06)	QAK...PQGMLNKQsRPLSS
  410-  428 (17.90/ 6.68)	DSGsmrPMKAATQQ.KPIGE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      74.92|      22|      23|     114|     135|       3
---------------------------------------------------------------------------
   97-  122 (30.72/13.30)	SSLGAPGGGALGGgiseDEDSDSEDD
  123-  142 (20.61/ 6.82)	ERLRRAAASNYGH..nyDDDND....
  148-  165 (23.59/ 8.73)	EE.QDAAAP.......aEEDHHAEDD
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22429 with Med26 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) HGCTASTGSVPPATPAVAEDKGSVRRVPEKESKVDSSSLGAPGGGALGGGISEDEDSDSEDDERLRRAAASNYGHNYDDDNDDEEEEEEQDAAAPAEEDHHAEDDDPEAEELEALTNEID
2) LSEFFDEMDEDGNLRHNNDARIGNKRENNGRRPANHSTVSKPELTRPVGTVERDQFRRPELTRQEPPMRHTNQQRPQGSNLQAKPQGMLNKQSRPLSSDSGSMRPMKAATQQKPIGEMKYKQTQEHFGVERKPTMGHVDASCTAFIRSQVRVGKAKDPGWLGKQRKVGSSQA
3) VALADNSPGTSNPSVVDDDDEEEGLPSPPLDEGAFFA
61
312
268
180
483
304










Molecular Recognition Features






MoRF SequenceStartStop




1) DERLRRAA
2) KDPGWLGKQRKVGSS
3) SNYGH
122
467
131
129
481
135