<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22428

Description Uncharacterized protein
SequenceMRNALRGSSMQPMSETASAQSDGEPAAAAPEEEEAGGGEESVNVFVAVPEQHKNGQLTLAWALRNLAELAPAAAVDVVVVVAHVHVPPQEIPVMGSKFHASKLREDLVSSYRKNERAKVNKHLKEYIRQCSKMKIKCRTLVIESEDVVKGITELVSLHGASKLVMGAAADKHFPRNPSKLLVPRSKTALEVMRQAHPSCKIWFVCREHLISISEDGTLRSPIPTPAIVPACRSPIPASTIVSARRNRYASSNNAVDSLIQRSMSEKVSPLWLPCRSAIRRTLSILSMEHVSVGSWDRNPRDSVPSSCREEASSDSSSSFELPIDDVFTIHHNTAPCHDDQAKKTEDVPKLKEDIAKVKEDIPLSKEEMEALKREHDDAIRKLSEADEAKAELEQRVVDLMERTSLLDSQLRLAEETRTTGSGLDFAWCSEFSLSELRQATRNFSDDAKVGDGVYRGVLRNTTVAIKMLHSHSSSQFQQEVGVVSRVRHPNLVTLMGCCPEASALVFEFLPNGSLEDRLARRDGTPPLAWQARTRIIGEVCSALVFLHSCEPCPVIHGDLNAANILLDANLVSKLGDYGASRLPTMTDPGSSPYTDPELLITGQLTAGSDVYSFGVVVLRLVTGQPALGIARKVEEALEKGEMEALVDRSAGEWPFAQAEKLMLLGLQCAELSSRRRPARMSQVWRVVEPLAKAASMSVAPESLVRSFGESHMPSYFICPISQEVMRNPHTAADGYTYEAEAIKGWLDSGHETSPMTKMPLVHRHVTPSYALRSAIQNYMQQRQQKMPQ
Length788
PositionTail
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.05
Grand average of hydropathy-0.310
Instability index55.59
Isoelectric point6.34
Molecular weight86757.95
Publications









Function






Annotated function

Functions as an E3 ubiquitin ligase.



ECO:0000256	ARBA:ARBA00003861

GO - Cellular Component
GO - Biological Function
ATP binding	GO:0005524	IEA:InterPro
protein kinase activity	GO:0004672	IEA:InterPro
ubiquitin-protein transferase activity	GO:0004842	IEA:InterPro

GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22428
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No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     124.11|      39|      41|     225|     265|       1
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  225-  265 (60.18/45.61)	PAIVPaCRSPIPAS.TIVSARRNRYAS.SNNAVDSlIQRSMSE
  269-  309 (63.93/39.67)	PLWLP.CRSAIRRTlSILSMEHVSVGSwDRNPRDS.VPSSCRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     139.42|      48|     245|     380|     439|       2
---------------------------------------------------------------------------
  380-  439 (55.76/54.17)	RKLSEADEaKAELEQrvvdLMERTSlldSQLRLAEETRTTGSGLDfawCSEFSlSELRQA
  631-  678 (83.65/42.79)	RKVEEALE.KGEMEA....LVDRSA...GEWPFAQAEKLMLLGLQ...CAELS.SRRRPA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     188.57|      60|     540|     147|     222|       4
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  147-  222 (87.21/95.92)	VVKGITELVSLHGASKLVMGAAADKHFprnPSKLLVPRSKtalEVMRQAHPSC..........KIWFvcrehlisisEDGTLRSPI
  686-  755 (101.36/69.69)	VVEPLAKAASMSVAPESLVRSFGESHM...PSYFICPISQ...EVMRNPHTAAdgytyeaeaiKGWL..........DSGHETSPM
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|     118.53|      36|     155|     313|     348|       5
---------------------------------------------------------------------------
  313-  348 (65.56/49.30)	SDSSSSFELPIDDVFTIHH.NTAP....CHDDQAKKTEDVP
  470-  510 (52.97/38.31)	SHSSSQFQQEVGVVSRVRHpNLVTlmgcCPEASALVFEFLP
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Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22428 with Med32 domain of Kingdom Viridiplantae


     
       
      
        
        
        


      
      
   
   

      

      














Intrinsically Disordered Regions








IDR SequenceStartStop




1) MRNALRGSSMQPMSETASAQSDGEPAAAAPEEEEAG
1
36










Molecular Recognition Features






MoRF SequenceStartStop




1) MRNAL
1
5