<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22420

Description Uncharacterized protein
SequenceMPMLACLLRTNHAVQVPMFAPPASLQPPAPGQLPRPGAPFPGPMTPNPPASIRLPFPVPPRTPNILYGANPQQGNLDVGASKSDAPSAPEVSPHTVQSLPPRPEGFGAVGGSAPGQRPSNLSTPPSLLQRPTGPAPSLPQTSPSGAAPGAVPRATQQQFYPSYPSAPGNPPQPLWGYPPQPTGFQQAPFHSYPPGSLGPLGTPMVGTSSVTTSLPNIQPPGITTGDPKEQPSINPGCVQSIHTSVEQHPTGLEDRSTAGVQDSDTWSAHKTEAGVLYYYNALTGESTYQRPLGYKGELEKVAAQPVPASWDKIAGTDWSIVTTSDGKKYYYDNKQKVSSWQLPPEVAELNKNADSGNLKGSSTSLQDAGTVANKGEASGEISTPAIQTGGRDSLPLRQTVAPASPSALDLIKKKLQDAGAFSVSSPLATPSSSASELNGSKPADGAPKEQQGSKNGEKSKDNNGNENMSDSSSDSDDEEHGPSKEDCIREFKKMLKERGVAPFSKWEKELPKIVFDSRFKAIPSHSTRRAIFDHFVRTRADEERKEKRAAQKAAVEAYKQLLEEASEGIDSKTGYQDFERKWGADPRFAALDKKEREALFKEKVRALEEKVQSARNAVITDFKSMLRECKDIIPTSRWTKVKENFRSDPRYIAVKHEERENAFNEYIAELKSAEWEVEQAAKAKVDEQAKLRERERETRKRKEREEQEMERVKLKIRRKDATSSYQALLVETIKDPKASWTESKPKLEKDPQGRAVNPDLGQGEAEKLFREHVKDLYERCVRDFRALLSEAIAPEAATRTTEGGKTLVISWSEAKDLLRSDPRYSKVSSKDRESIWWRYADDMVRKLKQPDTEKPDTNARQQQRQQRRSFDPPRRR
Length876
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.07
Grand average of hydropathy-0.896
Instability index50.50
Isoelectric point8.91
Molecular weight96555.79
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22420
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     116.25|      25|      25|     125|     149|       1
---------------------------------------------------------------------------
   18-   34 (24.57/ 6.66)	MFAPPAS............LQ.P..PA.PgQLP
   35-   60 (25.71/ 7.34)	R..PGAPFPGpmtpnpPASIRLPF.PV.P...P
  115-  139 (34.89/12.80)	GQRPSN......lstpPSLLQRPTGPA.P.SLP
  140-  167 (31.07/10.53)	QTSPSGAAPG....avPRATQQQFYPSyP.SAP
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|     174.21|      48|      49|     252|     300|       2
---------------------------------------------------------------------------
  252-  294 (72.78/49.76)	............LEDRSTAGVQDSDTWSAHKTEAGVLYYYNALTGE.STYQRPLGY
  296-  346 (70.41/49.45)	GELEKvaaqpvpASWDKIAG...TD.WSIVTTSDGKKYYYDNKQKV.SSWQLPPEV
  347-  383 (31.02/13.10)	AELNK..nadsgNLKGSSTSLQDAGT.VANKGEAS.........GEiST.......
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     171.77|      43|     112|      63|     105|       3
---------------------------------------------------------------------------
   43-   88 (43.26/16.77)	....PMT......PNPpasirlpfpvppR....TPNIL..YGANPQQGNLDVGASKSDAPSA
  171-  196 (40.64/15.28)	..................................PQPL..WGYPPQPTGFQQAPFHSYPPGS
  203-  230 (40.76/15.35)	PMVGTSSVtTSLP..............................NIQPPGITTG....DPKEQ
  384-  428 (47.11/18.94)	PAIQTGGR.DSLPLRQ............TvapaSPSALdlIKKKLQ....DAGAFSVSSPLA
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             3|      72.92|      15|      16|     430|     444|       4
---------------------------------------------------------------------------
  430-  444 (24.78/12.56)	PSSSASELNGSKPAD
  447-  461 (23.91/11.84)	PKEQQGSKNGEKSKD
  472-  486 (24.23/12.10)	SSDSDDEEHGPSKED
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      49.09|      15|      16|     674|     688|       5
---------------------------------------------------------------------------
  674-  688 (24.77/14.52)	EWEVEQAAKAKVDEQ
  693-  707 (24.32/14.13)	ERERETRKRKEREEQ
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     100.53|      20|      20|     596|     615|       6
---------------------------------------------------------------------------
  499-  518 (28.57/18.37)	GVAPFSK..WEKELPKIVFDSR
  528-  548 (21.77/12.09)	RRAIFDHfvRTRADEER.KEKR
  555-  573 (21.30/11.66)	VEA.YKQ..LLEEASEGIDSKT
  596-  615 (28.90/18.68)	REALFKE..KVRALEEKVQSAR
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             4|     158.04|      29|     172|     638|     666|       7
---------------------------------------------------------------------------
  638-  666 (51.87/31.50)	WTKVKENFRS.DPRYIAVKHE....ERENAFNEY
  740-  771 (34.58/18.38)	WTESKPKLEK.DPQGRAVNPDlgqgEAEKLFRE.
  777-  802 (21.97/ 8.81)	YERCVRDFRAlLSEAIAPEAA....TRTTE....
  811-  839 (49.63/29.81)	WSEAKDLLRS.DPRYSKVSSK....DRESIWWRY
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      36.94|      10|     130|     488|     497|       8
---------------------------------------------------------------------------
  488-  497 (18.33/12.75)	IREFKKMLKE
  619-  628 (18.62/13.07)	ITDFKSMLRE
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      62.10|      17|     141|      89|     105|      11
---------------------------------------------------------------------------
   89-  105 (33.53/18.24)	PEVSPHTVQSL....PPRPEG
  231-  251 (28.57/14.45)	PSINPGCVQSIhtsvEQHPTG
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22420 with Med35 domain of Kingdom Viridiplantae
Unable to open file!