<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22405

Description Uncharacterized protein
SequenceMPMLACLLRTNHAVQVPMFAPPASLQPPAPGQLPRPGAPFPGPMAPNPPASIRLPFPVPPRMPNILYGANPQQGNLDVGASKSDAPSAPEVSPHTVQSLPPRPEGFGAVGGSAPGQRPSNLSTPPSLLQRPTGPAPSLPQTSPSGAAPGAVPRATQQQFYPSYPSAPSYPSAPGNPPQPLWGYPPQPTGFQQAPFHSYPPGSLGPLGTPMVGTSSVTTSLPNIQPPGITTGDPKEQPSVNPGSVQSIHTSVEQHPTGLEDRSMAGVQDSDAWSAHKTEAGVLYYYNALTGESTYQRPPGYKGELEKVAAQPVPASWDKIAGTDWSIVTTSDGKKYYYDNKQKVSSWQLPPEVAELNKNADSGNLKGSSTSLQDAGTVANKGEASGEISTPALQTGGRDSLPLRQTVAPASPSALDLIKKKLQDAGAFSVSSPLATPSSSASELNGSKPADGAPKEQQGSKNGEKSKDNNGNENMSDSSSDSDDEEHGPSKEDCIREFKKMLKERGVAPFSKWEKELPKIVFDSRFKAIPSHSTRRAIFDHFVRTRADEERKEKRAAQKAAVEAYKQLLEEASEGIDSKPGYQDFERKWGADPRFVALDKKEREALFKEKVRALEEKVQSARNAVITDFKSMLRECKDIIPTSRWTKVKENFRSDPRYKAVKHEERENAFNEYIAELKSAEREVEQAAKAKVDEQAKLRERERETRKRKEREEQEMERVKLKIRRKDATSSYQALLVETIKDPKASWTESKPKLEKDPQGRAVNPDLGQGEAEKLFREHVKDLYERCRRDFRALLSEAIAPDAATRTTEGGKTVVISWSEAKDLLRSDPRYSKVASKDRESMWRRYADDMVRKLKQPDTEKPDTNARQQQQRQQQRRSSDPPRRR
Length884
PositionUnknown
OrganismTriticum aestivum (Wheat)
KingdomViridiplantae
LineageEukaryota> Viridiplantae> Streptophyta> Embryophyta> Tracheophyta> Spermatophyta> Magnoliopsida> Liliopsida> Poales> Poaceae> BOP clade> Pooideae> Triticodae> Triticeae> Triticinae> Triticum.
Aromaticity0.06
Grand average of hydropathy-0.929
Instability index54.54
Isoelectric point9.12
Molecular weight97318.66
Publications









Function






Annotated function


GO - Cellular Component
GO - Biological Function
GO - Biological Process








Interaction





Binary Interactions











Repeat regions





Repeats

>MDP22405
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             2|      69.67|      20|      24|      19|      41|       1
---------------------------------------------------------------------------
   19-   38 (42.22/10.91)	FAPPASLQ......PPAPGQLPRPGA
  150-  175 (27.45/ 6.67)	AVPRATQQqfypsyPSAPSYPSAPGN
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     370.84|      49|      74|     100|     148|       2
---------------------------------------------------------------------------
   59-   94 (46.56/15.34)	PPRmPNiLYGA....NP.QQ.GNLDVGAS.....K...............S.D.......APSAP...EVSP....H
  100-  148 (94.78/38.48)	PPR.PE.GFGAVGGSAPGQRPSNLSTPPSLLQRPT...............G.P.......APSLP...QTSPSGAAP
  184-  230 (57.18/20.44)	PPQ.PT.GF........QQAPFH.SYPPGSLG.PL...............GtPmvgtssvTTSLP...NIQPPGITT
  232-  267 (49.85/16.92)	DPK..E.Q.PSVN...PG...SVQSIHTSVEQHPT...............G............LE...DRSMAGVQ.
  268-  311 (61.32/22.43)	..D.SD.AWSAHKTEAGVLYYYNALTGESTYQRPP...............G.Y.......KGELE...KVA...AQP
  324-  373 (29.11/ 6.97)	........WSIVTTSDGKKYYYDNKQKVSSWQLPPevaelnknadsgnlkG.S.......STSLQ...D........
  375-  409 (32.04/ 8.38)	.......GTVANKGEASGE....ISTPA..LQ..T...............G.G.......RDSLPlrqTVAPA....
---------------------------------------------------------------------------
---------------------------------------------------------------------------
No. of Repeats|Total Score|Length  |Diagonal| BW-From|   BW-To|   Level
             7|     407.06|      53|      62|     556|     608|       3
---------------------------------------------------------------------------
  440-  477 (36.52/18.03)	...............ASELNGSKPADGAPKE...QQGSKN..GEKS..K.DNNGNENMSDS
  489-  540 (56.49/32.72)	SKEDCIREFKKMLKE..RGV..AP.FSKWEKelpKIVFDS..RFKA..IpSHSTRRAIFDH
  556-  608 (83.49/52.57)	AQKAAVEAYKQLLEEASEGIDSKPGYQDFER...KWGADP..RFVA..L.DKKEREALFKE
  620-  671 (77.05/47.84)	ARNAVITDFKSMLRECKDIIPT.SRWTKVKE...NFRSDP..RYKA..V.KHEERENAFNE
  686-  716 (39.28/20.06)	AAKAKVDEQAKLRER..............ER...E..TRK..R.........KEREEQEME
  723-  777 (56.67/32.85)	RRKDATSSYQALLVETIK..DPKASWTESKP...KLEKDPqgRAVNpdL.GQGEAEKLFRE
  795-  843 (57.55/33.50)	SEAIAPDAATRTTEGGKTVVISWSEAKDLLR......SDP..RYSK..V.ASKDRESMWR.
---------------------------------------------------------------------------




































Explaination for Stockholm format
  The  "Stockholm" format is a system for marking up features in a multiple alignment. These mark-up annotations are preceded by a 'magic' label, of which there are four types. The Stockholm format is used by HMMER, Pfam, and Belvu. Mark-up lines include any characters except whitespace. Underscore ("_") is used instead of space. 

 #=GR (seqname) PP (Generic per-Sequence AND per-Column markup, exactly 1 char per column) where PP is Posterior Probability  [0-9*], (0=0.00-0.05; 1=0.05-0.15; *=0.95-1.00) 
 
 #=GC PP_cons line is Stockholm-format consensus posterior probability annotation for the entire column.  It’s calculated simply as the arithmetic mean of the per-residue posterior probabilities in that column.  This should prove useful in phylogenetic inference applications, for example, where it’s common to mask away non confidently aligned columns of a multiple alignment. The PP_cons line provides an objective measure of the confidence assigned to each column.
 
 #=GC RF line is Stockholm-format reference coordinate annotation, with an x marking each column that the profile considered to be consensus.





Alignment of MDP22405 with Med35 domain of Kingdom Viridiplantae
Unable to open file!