<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Detailed information on MDP22321
Description |
Mediator of RNA polymerase II transcription subunit 16 |
Sequence | MELAYVCEWEKRPKSTHCPSIPLVCSWSCRNLVAFTTDLKNDDDDKDVSHMIHIIDTEHPWDVYSINSGHTEVISCLEWDQSGSRLLSADGDGQIKCWSMSDHLVNSWESVLSSSLDGDPIVALSWLHNGVKLALHVEMSGSTNFGEKFSRVKFSPSLTLFGGKPMEGWLAVTVSGLVTVSLLKPGGTLLTASESLCRLRGRVALADIAFTGGGNIVVAATDGSSSSPVQFYKVVVSVVSEKCRIDTELLPSLFLRCTTDPLRREKYPAVTHLKFLTRENSEQVLLCASNQSGSIVECWSLRKEGLPVNNIFQHRSPVVGEKQPTILKWRILTTTNDLERVSAVALPKLPISISNTDLKVASDTKFCPGLGLALAFHDGSIQILHRLSLHTMGVFYGSSSSSGQRPGDESAIKRQRTGGPALHFKALQFSWTSLALAGVDNHGKLHMLRVSPSMGQVLEMNTTLRHLLFLLEYCMVTGYDWWDVLLHVQPTMVHNLVEKLHEEYMRQNQALQQVLATRIVAVKASLCKLSTATAARACDFHAKLLLMAISSTLKSLLRPHVLNTPDKSPGDRLTEICAKNTDTDIDKVMINLKTEEFVLDGPPLQSLQQLIQWVGDFVLYLLANLPNQGSMVRPGFGFMRDGASLGMLREMLVMIRIWGLLKPGCLPTFTATSDNQDSMQLLFRLLTKLWLCSRDDGPPQDPDESLIDECCLLPSQLLVPSMDWLPVNDGVIVKLQGKHPLRLQFGKASSLPGGGTTAPLEVFTRSPGSQKMDNLRCVHMGVCPTEESKACTRCGCVTMLRSPNKTNAMKQWEQRWIKNCLCGGLWRRIPPTPLT |
Length | 835 |
Position | Tail |
Organism | Seriola dumerili (Greater amberjack) (Caranx dumerili) |
Kingdom | Metazoa |
Lineage | Eukaryota> Metazoa> Chordata> Craniata> Vertebrata> Euteleostomi>
Actinopterygii> Neopterygii> Teleostei> Neoteleostei> Acanthomorphata>
Carangaria> Carangiformes> Carangidae> Seriola.
|
Aromaticity | 0.06 |
Grand average of hydropathy | -0.060 |
Instability index | 47.36 |
Isoelectric point | 7.72 |
Molecular weight | 92336.86 |
Publications | |
Function
Annotated function |
Component of the Mediator complex, a coactivator involved in
the regulated transcription of nearly all RNA polymerase II-dependent
genes. Mediator functions as a bridge to convey information from gene-
specific regulatory proteins to the basal RNA polymerase II
transcription machinery. Mediator is recruited to promoters by direct
interactions with regulatory proteins and serves as a scaffold for the
assembly of a functional preinitiation complex with RNA polymerase II
and the general transcription factors.
ECO:0000256 RuleBase:RU364149
|
GO - Cellular Component | mediator complex GO:0016592 IEA:InterPro
|
GO - Biological Function | catalytic activity GO:0003824 IEA:InterPro
|
GO - Biological Process | |
Interaction
Repeat regions
Repeats |
>MDP22321
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
2| 46.11| 14| 82| 293| 322| 3
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93- 106 (31.17/ 9.66) GQI.KCWSM.SDHL.VN
293- 309 (14.94/12.30) GSIvECWSLrKEGLpVN
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No. of Repeats|Total Score|Length |Diagonal| BW-From| BW-To| Level
3| 149.27| 34| 98| 600| 633| 7
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600- 633 (60.50/31.86) DGPPLQSLQQLIQWVGDFVLYLLAN....LP.NQGSMVR
641- 666 (38.45/17.75) DGASLGMLREM......LVMIRIWG....LL.KPGCL..
696- 734 (50.33/25.35) DGPPQDPDESLIDECCLLPSQLLVPsmdwLPvNDGVIVK
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